RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	N4BP3	O15049	544 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	CCDC152	Q4G0S7	254 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	LDHAL6A	Q6ZMR3	332 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	NCOA7	Q8NI08	942 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	ABCC5	O15440	1437 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	RFC1	P35251	1148 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	CCDC184	Q52MB2	194 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	TACC1	O75410	805 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	HAND2	P61296	217 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	FAM204A	Q9H8W3	233 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	NAPA	P54920	295 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	NBPF14	Q5TI25	921 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	SRGAP1	Q7Z6B7	1085 aa		13.61	□□□□□ -0.23
ABCA2-208	ENST00000459850	GSDMD	P57764	484 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	SNW1	Q13573	536 aa	Known RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	PDE1C	Q14123	709 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	DDX19A	Q9NUU7	478 aa	Known RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	USP16	Q9Y5T5	823 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	RAPGEF6	Q8TEU7	1601 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	ZNF526	Q8TF50	670 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	8e-6	■■■□□ 14.7
ABCA2-208	ENST00000459850	ESPN	B1AK53	854 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	CYLC1	P35663	651 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	ATRIP	Q8WXE1	791 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	SEPT8	Q92599	483 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	RIOK1	Q9BRS2	568 aa	Known RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	TMOD4	Q9NZQ9	345 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	SCAF11	Q99590	1463 aa	Known RBP	13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	TNNI2	P48788	182 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	SH2D4B	Q5SQS7	431 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	LMBR1	Q8WVP7	490 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	ECHDC1	Q9NTX5	307 aa		13.6	□□□□□ -0.23
ABCA2-208	ENST00000459850	CASQ2	O14958	399 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	HMG20B	Q9P0W2	317 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	FRMD4B	Q9Y2L6	1034 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	ZNF804A	Q7Z570	1209 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	ZSCAN30	Q86W11	494 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	FNBP1	Q96RU3	617 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	WDR44	Q5JSH3	913 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	CEP85L	Q5SZL2	805 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	CD2AP	Q9Y5K6	639 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	ATP5J2-PTCD1	G3V325	749 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	ABL1	P00519	1130 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	WTAP	Q15007	396 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	ZNF569	Q5MCW4	686 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	PARP3	Q9Y6F1	533 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	UQCRFS1P1	P0C7P4	283 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	CLUL1	Q15846	466 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	LARP6	Q9BRS8	491 aa	Known RBP	13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	IVNS1ABP	Q9Y6Y0	642 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	GNL1	P36915	607 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	TMTC4	Q5T4D3	741 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	NEK1	Q96PY6	1258 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	STK25	O00506	426 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	ANKRD24	Q8TF21	1146 aa		13.59	□□□□□ -0.23
ABCA2-208	ENST00000459850	NOS1	P29475	1434 aa		13.58	□□□□□ -0.23
ABCA2-208	ENST00000459850	ESYT2	A0FGR8	921 aa		13.58	□□□□□ -0.23
ABCA2-208	ENST00000459850	CDR2	Q01850	454 aa		13.58	□□□□□ -0.23
ABCA2-208	ENST00000459850	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.58	□□□□□ -0.23
ABCA2-208	ENST00000459850	PBRM1	Q86U86	1689 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	MGEA5	O60502	916 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	NEMF	O60524	1076 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	PPFIA1	Q13136	1202 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	RRAGB	Q5VZM2	374 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	CHMP6	Q96FZ7	201 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	SNRPA1	P09661	255 aa	Known RBP	13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	KIFAP3	Q92845	792 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	INPP1	P49441	399 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	CASC4	Q6P4E1	433 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	PPFIBP2	Q8ND30	876 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	SKA2	Q8WVK7	121 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	DMRT2	Q9Y5R5	561 aa		13.58	□□□□□ -0.24
ABCA2-208	ENST00000459850	KRT23	Q9C075	422 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	ACSBG1	Q96GR2	724 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	OAT	P04181	439 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	ASIC1	P78348	528 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	CDAN1	Q8IWY9	1227 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	PKD2L1	Q9P0L9	805 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	PPFIA2	O75334	1257 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	SSFA2	P28290	1259 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	TRPC3	Q13507	836 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	UBE3B	Q7Z3V4	1068 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	CTAGE1	Q96RT6	745 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	BIRC3	Q13489	604 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	SETDB1	Q15047	1291 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	MRRF	Q96E11	262 aa	Known RBP	13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	ITM2B	Q9Y287	266 aa		13.57	□□□□□ -0.24
ABCA2-208	ENST00000459850	TRIM27	P14373	513 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	HSP90AA4P	Q58FG1	418 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	HS2ST1	Q7LGA3	356 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	ACRBP	Q8NEB7	543 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	VCX3B	Q9H321	246 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	SNRK	Q9NRH2	765 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	MCM5	P33992	734 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	RAB3GAP1	Q15042	981 aa		13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	RRP36	Q96EU6	259 aa	Known RBP	13.56	□□□□□ -0.24
ABCA2-208	ENST00000459850	C8orf37	Q96NL8	207 aa		13.56	□□□□□ -0.24

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