RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 IKBKEQ14164 716 aa5.4□□□□□ -1.54
SCARNA18-201ENST00000459004 PRPF40BQ6NWY9 871 aaKnown RBP5.4□□□□□ -1.54
SCARNA18-201ENST00000459004 VN1R5Q7Z5H4 357 aa5.4□□□□□ -1.54
SCARNA18-201ENST00000459004 SEC31BQ9NQW1 1179 aa5.4□□□□□ -1.54
SCARNA18-201ENST00000459004 SOX1O00570 391 aaPredicted RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 LDHBP07195 334 aaKnown RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 ITPKAP23677 461 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 CD68P34810 354 aaPredicted RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 PTPN12Q05209 780 aaKnown RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 ADGRE1Q14246 886 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 GRM2Q14416 872 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 SUZ12Q15022 739 aaKnown RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 SPRED3Q2MJR0 410 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 EAPPQ56P03 285 aaPredicted RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 SHISA2Q6UWI4 295 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 GALNT11Q8NCW6 608 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 GLIS3Q8NEA6 775 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 SOX17Q9H6I2 414 aaPredicted RBP5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 USP21Q9UK80 565 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 WWC3Q9ULE0 1092 aa5.39□□□□□ -1.55
SCARNA18-201ENST00000459004 TMEM238LA0A1B0GVL6 79 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 TM4SF5O14894 197 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 GIPC1O14908 333 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 EIF4EBP3O60516 100 aaPredicted RBP5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 ESRRAP11474 423 aaPredicted RBP5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 C19orf57Q0VDD7 668 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 TMCO4Q5TGY1 634 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 PI16Q6UXB8 463 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 NPAS4Q8IUM7 802 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 TMEM130Q8N3G9 435 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 SLC7A3Q8WY07 619 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 KLHDC7BQ96G42 594 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 FRMD6Q96NE9 622 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 CARD10Q9BWT7 1032 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 BCO2Q9BYV7 579 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 MRPL18Q9H0U6 180 aaKnown RBP5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 CLEC4MQ9H2X3 399 aaPredicted RBP5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 ZFYVE1Q9HBF4 777 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 ABCB6Q9NP58 842 aa5.38□□□□□ -1.55
SCARNA18-201ENST00000459004 MSTNO14793 375 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 GATA4P43694 442 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 PCDH1Q08174 1060 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 MBTPS1Q14703 1052 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 FOXD4L6Q3SYB3 417 aaPredicted RBP5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 GPAT2Q6NUI2 795 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 FOXD4L3Q6VB84 417 aaPredicted RBP5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 SETDB2Q96T68 719 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 SPG7Q9UQ90 795 aa5.37□□□□□ -1.55
SCARNA18-201ENST00000459004 PRPF40AO75400 957 aaKnown RBP5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 FCGRTP55899 365 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 ZNF423Q2M1K9 1284 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 RPS26P11Q5JNZ5 115 aaPredicted RBP5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 HGSNATQ68CP4 663 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 NXPE4Q6UWF7 544 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 DTHD1Q6ZMT9 781 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 TXNRD3Q86VQ6 643 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 WFDC12Q8WWY7 111 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 SPOCK3Q9BQ16 436 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 SRCIN1Q9C0H9 1055 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 ZNF576Q9H609 170 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 KCNK4Q9NYG8 393 aa5.36□□□□□ -1.55
SCARNA18-201ENST00000459004 F8W735 103 aaPredicted RBP5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 PROCP04070 461 aa5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 GSTM4Q03013 218 aa5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 TRIM26Q12899 539 aaPredicted RBP5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 DUOXA2Q1HG44 320 aa5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 OSBPL7Q9BZF2 842 aa5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 AKTIPQ9H8T0 292 aa5.35□□□□□ -1.55
SCARNA18-201ENST00000459004 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 ADAM11O75078 769 aa5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 B3GALT4O96024 378 aa5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 NOS3P29474 1203 aa5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 GSTT1P30711 240 aa5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 NLRP12P59046 1061 aa5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 FOXD4L4Q8WXT5 416 aaPredicted RBP5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 DUSP9Q99956 384 aaKnown RBP5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 C12orf49Q9H741 205 aa5.34□□□□□ -1.55
SCARNA18-201ENST00000459004 WISP1O95388 367 aa5.33□□□□□ -1.56
SCARNA18-201ENST00000459004 GNA15P30679 374 aa5.33□□□□□ -1.56
SCARNA18-201ENST00000459004 MFAP1P55081 439 aaKnown RBP5.33□□□□□ -1.56
SCARNA18-201ENST00000459004 ACAD11Q709F0 780 aa5.33□□□□□ -1.56
SCARNA18-201ENST00000459004 FBXO33Q7Z6M2 555 aa5.33□□□□□ -1.56
SCARNA18-201ENST00000459004 AKAP2Q9Y2D5 859 aa5.33□□□□□ -1.56
SCARNA18-201ENST00000459004 ALX3O95076 343 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 CYP11A1P05108 521 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 EIF4BP23588 611 aaKnown RBP5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 FAAP100Q0VG06 881 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 KIAA1211Q6ZU35 1233 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 AGGF1Q8N302 714 aaeCLIP5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 C3orf58Q8NDZ4 430 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 UBASH3BQ8TF42 649 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 RUSC1Q9BVN2 902 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 FAM8A1Q9UBU6 413 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 PARP2Q9UGN5 583 aa5.32□□□□□ -1.56
SCARNA18-201ENST00000459004 AK5Q9Y6K8 562 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms