RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 RREB1Q92766 1687 aa13.87□□□□□ -0.19
SYNE2-207ENST00000458046 C7P10643 843 aa13.87□□□□□ -0.19
SYNE2-207ENST00000458046 MCM5P33992 734 aa13.87□□□□□ -0.19
SYNE2-207ENST00000458046 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
SYNE2-207ENST00000458046 TPCN1Q9ULQ1 816 aa13.87□□□□□ -0.19
SYNE2-207ENST00000458046 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-207ENST00000458046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-207ENST00000458046 GPR37O15354 613 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 KLF15Q9UIH9 416 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 CHMP3Q9Y3E7 222 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 NUB1Q9Y5A7 615 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 TAF6LQ9Y6J9 622 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 A0A0D9SFI3 127 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 DDX58O95786 925 aaKnown RBP13.86□□□□□ -0.19
SYNE2-207ENST00000458046 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 ZSCAN31Q96LW9 406 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-207ENST00000458046 FSD1Q9BTV5 496 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 TM6SF1Q9BZW5 370 aa13.86□□□□□ -0.19
SYNE2-207ENST00000458046 SHANK3Q9BYB0 1731 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 ADCY5O95622 1261 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 APPP05067 770 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 PDIA6Q15084 440 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 MAP4K1Q92918 833 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 CCDC102AQ96A19 550 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 EDC3Q96F86 508 aaKnown RBP13.85□□□□□ -0.19
SYNE2-207ENST00000458046 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYNE2-207ENST00000458046 SH2B1Q9NRF2 756 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-207ENST00000458046 SLC27A2O14975 620 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-207ENST00000458046 LARP1BQ659C4 914 aaKnown RBP13.85□□□□□ -0.19
SYNE2-207ENST00000458046 FAM184AQ8NB25 1140 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 IRF2BPLQ9H1B7 796 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 USP21Q9UK80 565 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 RGPD2P0DJD1 1756 aa13.85□□□□□ -0.19
SYNE2-207ENST00000458046 BIRC2Q13490 618 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 UQCRHLA0A096LP55 91 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 GOLIM4O00461 696 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 LETM1O95202 739 aaPredicted RBP13.84□□□□□ -0.19
SYNE2-207ENST00000458046 UQCRHP07919 91 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 UVSSAQ2YD98 709 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 EPHA10Q5JZY3 1008 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 TTC30BQ8N4P2 665 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 SPON1Q9HCB6 807 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
SYNE2-207ENST00000458046 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.19
SYNE2-207ENST00000458046 STK3Q13188 491 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 OXER1Q8TDS5 423 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 MYD88Q99836 296 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
SYNE2-207ENST00000458046 RYDENQ9NUL5 291 aaKnown RBP13.83□□□□□ -0.2
SYNE2-207ENST00000458046 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 KIAA2012Q0VF49 1180 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 COPS6Q7L5N1 327 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
SYNE2-207ENST00000458046 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-207ENST00000458046 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 HIP1O00291 1037 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 PSMA5P28066 241 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 TERF1P54274 439 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 DNTTIP2Q5QJE6 756 aaKnown RBP13.82□□□□□ -0.2
SYNE2-207ENST00000458046 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 LARP1Q6PKG0 1096 aaKnown RBP13.82□□□□□ -0.2
SYNE2-207ENST00000458046 BLOC1S2Q6QNY1 142 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 CDC37L1Q7L3B6 337 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 C17orf53Q8N3J3 647 aaPredicted RBP13.82□□□□□ -0.2
SYNE2-207ENST00000458046 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 USP54Q70EL1 1684 aa13.82□□□□□ -0.2
SYNE2-207ENST00000458046 UTYO14607 1347 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 CHGBP05060 677 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
SYNE2-207ENST00000458046 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
SYNE2-207ENST00000458046 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
SYNE2-207ENST00000458046 TNS1Q9HBL0 1735 aaKnown RBP13.81□□□□□ -0.2
SYNE2-207ENST00000458046 NEURL1BA8MQ27 555 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 GCKRQ14397 625 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 CAMK4Q16566 473 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
SYNE2-207ENST00000458046 TFIP11Q9UBB9 837 aaKnown RBP13.81□□□□□ -0.2
SYNE2-207ENST00000458046 CHD2O14647 1828 aaKnown RBP13.81□□□□□ -0.2
SYNE2-207ENST00000458046 NRDCO43847 1150 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
SYNE2-207ENST00000458046 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 ADGRL3Q9HAR2 1447 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 AP5Z1O43299 807 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 AMHR2Q16671 573 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 JAZF1Q86VZ6 243 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 PDCL3Q9H2J4 239 aa13.8□□□□□ -0.2
SYNE2-207ENST00000458046 DMGDHQ9UI17 866 aaKnown RBP13.8□□□□□ -0.2
SYNE2-207ENST00000458046 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
SYNE2-207ENST00000458046 FMNL3Q8IVF7 1028 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms