RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 F6X3S4 739 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 TPD52P55327 224 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 UBE3BQ7Z3V4 1068 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 ALG1Q9BT22 464 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 GABPB1Q06547 395 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 LRRC45Q96CN5 670 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 ANKIB1Q9P2G1 1089 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 KIAA0753Q2KHM9 967 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 RNF187Q5TA31 235 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 PAG1Q9NWQ8 432 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 LRRIQ1Q96JM4 1722 aa9.63□□□□□ -0.87
NEDD4L-209ENST00000456986 ATP5DP30049 168 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CCT2P78371 535 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 RPGRIP1Q96KN7 1286 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CCDC40Q4G0X9 1142 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 GIMAP6Q6P9H5 292 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CCDC8Q9H0W5 538 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 TRMT112Q9UI30 125 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 ARAP3Q8WWN8 1544 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 PPFIA2O75334 1257 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 VAMP4O75379 141 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 GNA11P29992 359 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.879e-7■■■■□ 24
NEDD4L-209ENST00000456986 TRIM75PA6NK02 468 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 TMEM87AQ8NBN3 555 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 MIS18AQ9NYP9 233 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 HDAC9Q9UKV0 1011 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 MPHOSPH10O00566 681 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 FAM160A1Q05DH4 1040 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CCDC96Q2M329 555 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CCDC77Q9BR77 488 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 TRMT1Q9NXH9 659 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 LMAN1P49257 510 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 MAP3K7CLP57077 242 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 VWA3BQ502W6 1294 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 MICU3Q86XE3 530 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CCDC50Q8IVM0 306 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 PTPRTO14522 1441 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 VAV2P52735 878 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 LDHAL6AQ6ZMR3 332 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
NEDD4L-209ENST00000456986 RFC1P35251 1148 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 KRT2P35908 639 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 Q6ZUG5 572 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 CREB3L3Q68CJ9 461 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 RPGRQ92834 1020 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 MEIS3Q99687 375 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 IKBKGQ9Y6K9 419 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 EBAG9O00559 213 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 CHMLP26374 656 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 DACT1Q9NYF0 836 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 SATB1Q01826 763 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 PIBF1Q8WXW3 757 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 BCORL1Q5H9F3 1711 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 MRPS9P82933 396 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 RILPL1Q5EBL4 403 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 TTF2Q9UNY4 1162 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 TBCAO75347 108 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 RBM5P52756 815 aaKnown RBP eCLIP9.61□□□□□ -0.873e-7■■■■□ 25.8
NEDD4L-209ENST00000456986 MAP7D1Q3KQU3 841 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 WHAMMQ8TF30 809 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 KLF18A0A0U1RQI7 1052 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 TSPY2A6NKD2 308 aa9.61□□□□□ -0.87
NEDD4L-209ENST00000456986 AKR1B10O60218 316 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 HOXA7P31268 230 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 CCDC129Q6ZRS4 1044 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 ZSCAN29Q8IWY8 852 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 GBP7Q8N8V2 638 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 IQUBQ8NA54 791 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 MYRIPQ8NFW9 859 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 CHPF2Q9P2E5 772 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 ATP10AO60312 1499 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 MPRIPQ6WCQ1 1025 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 TSKSQ9UJT2 592 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 MYH10P35580 1976 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 ACTN2P35609 894 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 CFAP58Q5T655 872 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 IBSPP21815 317 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 MYL5Q02045 173 aa9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 DNM1Q05193 864 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-209ENST00000456986 MGEA5O60502 916 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms