RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
LINC00887-204ENST00000456816 STAP2Q9UGK3 403 aa17.22■□□□□ 0.35
LINC00887-204ENST00000456816 AOX1Q06278 1338 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 USP17L3A6NCW0 530 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 USP17L4A6NCW7 530 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 SCARF1Q14162 830 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 PI16Q6UXB8 463 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 USP17L1Q7RTZ2 530 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 ZNF512BQ96KM6 892 aaPredicted RBP17.21■□□□□ 0.35
LINC00887-204ENST00000456816 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
LINC00887-204ENST00000456816 COL4A5P29400 1685 aa17.2■□□□□ 0.34
LINC00887-204ENST00000456816 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
LINC00887-204ENST00000456816 ZAP70P43403 619 aa17.2■□□□□ 0.34
LINC00887-204ENST00000456816 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
LINC00887-204ENST00000456816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00887-204ENST00000456816 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
LINC00887-204ENST00000456816 TRIM6-TRIM34B2RNG4 842 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 GOLIM4O00461 696 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
LINC00887-204ENST00000456816 TNIP1Q15025 636 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 HAUS7Q99871 368 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
LINC00887-204ENST00000456816 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 STRIP1Q5VSL9 837 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
LINC00887-204ENST00000456816 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 PDS5AQ29RF7 1337 aaKnown RBP17.18■□□□□ 0.34
LINC00887-204ENST00000456816 FAM205AQ6ZU69 1335 aa17.18■□□□□ 0.34
LINC00887-204ENST00000456816 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
LINC00887-204ENST00000456816 FZD9O00144 591 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 PSMD14O00487 310 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 CXCL9Q07325 125 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
LINC00887-204ENST00000456816 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 ZNF541Q9H0D2 1346 aa17.17■□□□□ 0.34
LINC00887-204ENST00000456816 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
LINC00887-204ENST00000456816 TBC1D9Q6ZT07 1266 aa17.16■□□□□ 0.34
LINC00887-204ENST00000456816 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
LINC00887-204ENST00000456816 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
LINC00887-204ENST00000456816 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
LINC00887-204ENST00000456816 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
LINC00887-204ENST00000456816 CYP2E1P05181 493 aaPredicted RBP17.15■□□□□ 0.34
LINC00887-204ENST00000456816 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
LINC00887-204ENST00000456816 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
LINC00887-204ENST00000456816 DACT2Q5SW24 774 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 TIAM2Q8IVF5 1701 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 MYO3BQ8WXR4 1341 aa17.15■□□□□ 0.34
LINC00887-204ENST00000456816 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
LINC00887-204ENST00000456816 RSBN1LQ6PCB5 846 aaPredicted RBP17.14■□□□□ 0.33
LINC00887-204ENST00000456816 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
LINC00887-204ENST00000456816 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00887-204ENST00000456816 ANTXR1Q9H6X2 564 aa17.14■□□□□ 0.33
LINC00887-204ENST00000456816 PIH1D3Q9NQM4 214 aaKnown RBP17.14■□□□□ 0.33
LINC00887-204ENST00000456816 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
LINC00887-204ENST00000456816 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
LINC00887-204ENST00000456816 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
LINC00887-204ENST00000456816 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 ZBTB22O15209 634 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
LINC00887-204ENST00000456816 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
LINC00887-204ENST00000456816 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 GPC2Q8N158 579 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
LINC00887-204ENST00000456816 SBF1O95248 1867 aa17.13■□□□□ 0.33
LINC00887-204ENST00000456816 GOLGB1Q14789 3259 aaKnown RBP17.13■□□□□ 0.33
LINC00887-204ENST00000456816 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
LINC00887-204ENST00000456816 PRDX5P30044 214 aa17.12■□□□□ 0.33
LINC00887-204ENST00000456816 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
LINC00887-204ENST00000456816 CERS5Q8N5B7 392 aa17.12■□□□□ 0.33
LINC00887-204ENST00000456816 TTF2Q9UNY4 1162 aaKnown RBP17.12■□□□□ 0.33
LINC00887-204ENST00000456816 MAST3O60307 1309 aa17.12■□□□□ 0.33
LINC00887-204ENST00000456816 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
LINC00887-204ENST00000456816 RPS12P25398 132 aaKnown RBP17.11■□□□□ 0.33
LINC00887-204ENST00000456816 GMPSP49915 693 aaPredicted RBP17.11■□□□□ 0.33
LINC00887-204ENST00000456816 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 OGFOD1Q8N543 542 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 AGBL3Q8NEM8 1001 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 CHD4Q14839 1912 aa17.11■□□□□ 0.33
LINC00887-204ENST00000456816 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
LINC00887-204ENST00000456816 SCN9AQ15858 1988 aa17.1■□□□□ 0.33
LINC00887-204ENST00000456816 SDSP20132 328 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms