RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 PLA2G2EQ9NZK7 142 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 DMGDHQ9UI17 866 aaKnown RBP6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 SUGT1Q9Y2Z0 365 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 PCDHB11Q9Y5F2 797 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 USP19O94966 1318 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 PEAK1Q9H792 1746 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 TPD52L2O43399 206 aaKnown RBP6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 IGFBP4P22692 258 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 AMPHP49418 695 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 EIF4A2Q14240 407 aaKnown RBP6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 ERFEQ4G0M1 354 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 GORABQ5T7V8 394 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 SH3RF1Q7Z6J0 888 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 USP48Q86UV5 1035 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 ARHGEF25Q86VW2 580 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 CCDC146Q8IYE0 955 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 GAS2L2Q8NHY3 880 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 NKX2-3Q8TAU0 364 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 IP6K1Q92551 441 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 RUNDC1Q96C34 613 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 CCDC87Q9NVE4 849 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 DDX41Q9UJV9 622 aaKnown RBP6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 KIF24Q5T7B8 1368 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 SLIT3O75094 1523 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 NFAT5O94916 1531 aa6.66□□□□□ -1.34
HMGB1P4-201ENST00000455362 LTN1O94822 1766 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 PNMA6FA0A0J9YX94 578 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 APAF1O14727 1248 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 TOM1O60784 492 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 GNA15P30679 374 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 HOXC9P31274 260 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 EIF1AXP47813 144 aaKnown RBP6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 ZNF394Q53GI3 561 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 C16orf46Q6P387 395 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 TCP11L2Q8N4U5 519 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 NGEFQ8N5V2 710 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 CRELD1Q96HD1 420 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 PLEKHF1Q96S99 279 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 PNNQ9H307 717 aaKnown RBP6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 IL21Q9HBE4 155 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 PCDHGB7Q9Y5F8 929 aa6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 MRPL42Q9Y6G3 142 aaKnown RBP6.65□□□□□ -1.34
HMGB1P4-201ENST00000455362 ARHGEF10O15013 1369 aa6.65□□□□□ -1.35
HMGB1P4-201ENST00000455362 FLT4P35916 1363 aa6.65□□□□□ -1.35
HMGB1P4-201ENST00000455362 TNS3Q68CZ2 1445 aa6.65□□□□□ -1.35
HMGB1P4-201ENST00000455362 MED1Q15648 1581 aaPredicted RBP6.65□□□□□ -1.35
HMGB1P4-201ENST00000455362 NHSL1Q5SYE7 1610 aa6.65□□□□□ -1.35
HMGB1P4-201ENST00000455362 GPR182O15218 404 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 ZPR1O75312 459 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 KCNC4Q03721 635 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 PTCRAQ6ISU1 281 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 MCF2L2Q86YR7 1114 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 CKAP2LQ8IYA6 745 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 SCG3Q8WXD2 468 aaKnown RBP6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 BAP1Q92560 729 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 ALKBH8Q96BT7 664 aaKnown RBP6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 SETDB2Q96T68 719 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 SLC6A16Q9GZN6 736 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 NIF3L1Q9GZT8 377 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 COL4A3BPQ9Y5P4 624 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 ROBO1Q9Y6N7 1651 aa6.64□□□□□ -1.35
HMGB1P4-201ENST00000455362 RTL1A6NKG5 1358 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 UBAP1LF5GYI3 381 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 FZD6O60353 706 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 HMOX1P09601 288 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 XRCC5P13010 732 aaKnown RBP6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 RACK1P63244 317 aaKnown RBP6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 FILIP1Q7Z7B0 1213 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 ZNF511Q8NB15 262 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 LRRC59Q96AG4 307 aaKnown RBP6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 PHRF1Q9P1Y6 1649 aaKnown RBP6.63□□□□□ -1.35
HMGB1P4-201ENST00000455362 RGPD5Q99666 1765 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 RGPD1P0DJD0 1748 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 CRYBG1Q9Y4K1 1723 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 IQSEC2Q5JU85 1478 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 ZNF521Q96K83 1311 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 ESPNB1AK53 854 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 K7ELQ4 463 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 BACH1O14867 736 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 PRKAR2BP31323 418 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 TMPOP42166 694 aaKnown RBP6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 PIP4K2BP78356 416 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 SULT6B1Q6IMI4 303 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 EXOC8Q8IYI6 725 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 FOXJ1Q92949 421 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 LTV1Q96GA3 475 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 FRMD6Q96NE9 622 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 STIM2Q9P246 746 aa6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 RRP7AQ9Y3A4 280 aaKnown RBP6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P4-201ENST00000455362 COL18A1P39060 1754 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms