RNA–Protein interactions for RNA: ENST00000454909.6

SATB1-209, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 3,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-209ENST00000454909 CDK5RAP2Q96SN8 1893 aa7.34□□□□□ -1.23
SATB1-209ENST00000454909 MAST3O60307 1309 aa7.34□□□□□ -1.23
SATB1-209ENST00000454909 CYP2E1P05181 493 aaPredicted RBP7.34□□□□□ -1.23
SATB1-209ENST00000454909 KCNJ4P48050 445 aa7.34□□□□□ -1.23
SATB1-209ENST00000454909 RASGRF1Q13972 1273 aa7.34□□□□□ -1.23
SATB1-209ENST00000454909 MMP10P09238 476 aa7.34□□□□□ -1.24
SATB1-209ENST00000454909 SRGNP10124 158 aa7.34□□□□□ -1.24
SATB1-209ENST00000454909 ZKSCAN1P17029 563 aaPredicted RBP7.34□□□□□ -1.24
SATB1-209ENST00000454909 MAP3K12Q12852 859 aa7.34□□□□□ -1.24
SATB1-209ENST00000454909 ZGPATQ8N5A5 531 aaKnown RBP7.34□□□□□ -1.24
SATB1-209ENST00000454909 MASTLQ96GX5 879 aa7.34□□□□□ -1.24
SATB1-209ENST00000454909 RBM8AQ9Y5S9 174 aaKnown RBP7.34□□□□□ -1.24
SATB1-209ENST00000454909 SNX14Q9Y5W7 946 aa7.34□□□□□ -1.24
SATB1-209ENST00000454909 PPEF1O14829 653 aaPredicted RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 PSMA5P28066 241 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 FKBP4Q02790 459 aaKnown RBP eCLIP7.33□□□□□ -1.24
SATB1-209ENST00000454909 HELBQ8NG08 1087 aaPredicted RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 EDC3Q96F86 508 aaKnown RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 ECM29Q5VYK3 1845 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 TCRBV5S4A2TA0A5A2 114 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 GNAT2P19087 354 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 ZNF804AQ7Z570 1209 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 PIH1D3Q9NQM4 214 aaKnown RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 CTNNA3Q9UI47 895 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 CIZ1Q9ULV3 898 aaPredicted RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 ATP6V0A2Q9Y487 856 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 SLX4Q8IY92 1834 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 PTH1RQ03431 593 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 ALX1Q15699 326 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 CREB3L3Q68CJ9 461 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 ZNF589Q86UQ0 364 aaPredicted RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 CERS3Q8IU89 383 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 FAM84BQ96KN1 310 aaPredicted RBP7.33□□□□□ -1.24
SATB1-209ENST00000454909 ANTXR1Q9H6X2 564 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 SNED1Q8TER0 1413 aa7.33□□□□□ -1.24
SATB1-209ENST00000454909 ARFGEF1Q9Y6D6 1849 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 SLC27A2O14975 620 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 PDE6AP16499 860 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 HIBADHP31937 336 aaKnown RBP7.32□□□□□ -1.24
SATB1-209ENST00000454909 SPTY2D1Q68D10 685 aaPredicted RBP7.32□□□□□ -1.24
SATB1-209ENST00000454909 CC2D2BQ6DHV5 1058 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 MYH2Q9UKX2 1941 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 WDR19Q8NEZ3 1342 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 HMGB1P09429 215 aaKnown RBP7.32□□□□□ -1.24
SATB1-209ENST00000454909 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 ZSWIM6Q9HCJ5 1215 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 NT5C2P49902 561 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 BCAMP50895 628 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 PALD1Q9ULE6 856 aa7.32□□□□□ -1.24
SATB1-209ENST00000454909 M0R2C6 588 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 IL1R1P14778 569 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 GSE1Q14687 1217 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 VPS37DQ86XT2 251 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 TDRD7Q8NHU6 1098 aaKnown RBP7.31□□□□□ -1.24
SATB1-209ENST00000454909 WDR66Q8TBY9 1149 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 TTC14Q96N46 770 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 BRPF3Q9ULD4 1205 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 GPSM2P81274 684 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 ANKRD1Q15327 319 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 CNKSR1Q969H4 720 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 OSBP2Q969R2 916 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 FAM205AQ6ZU69 1335 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 ZNF532Q9HCE3 1301 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 FER1L6Q2WGJ9 1857 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 HSPD1P10809 573 aaKnown RBP7.31□□□□□ -1.24
SATB1-209ENST00000454909 DDIT3P35638 169 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 SLC9C2Q5TAH2 1124 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
SATB1-209ENST00000454909 FBXL16Q8N461 479 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 ANKIB1Q9P2G1 1089 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 SUGT1Q9Y2Z0 365 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 NDUFB9Q9Y6M9 179 aa7.31□□□□□ -1.24
SATB1-209ENST00000454909 H0YIN7 160 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 GPAA1O43292 621 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 GYG1P46976 350 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 CUL4AQ13619 759 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 INTS4Q96HW7 963 aaKnown RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 EYA3Q99504 573 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 RTFDC1Q9BY42 306 aaPredicted RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 TMX4Q9H1E5 349 aaPredicted RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 CYP46A1Q9Y6A2 500 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 GIMAP6Q6P9H5 292 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 RUFY3Q7L099 469 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 C2CD5Q86YS7 1000 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 CCDC24Q8N4L8 307 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 TBC1D22AQ8WUA7 517 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 UBE2Q2Q8WVN8 375 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 PKNOX2Q96KN3 472 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 IDH1O75874 414 aaKnown RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 UFL1O94874 794 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 FKBP1AP62942 108 aaKnown RBP7.3□□□□□ -1.24
SATB1-209ENST00000454909 GSTO1P78417 241 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 SUPT20HQ8NEM7 779 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 TBC1D16Q8TBP0 767 aa7.3□□□□□ -1.24
SATB1-209ENST00000454909 COA1Q9GZY4 146 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms