RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 TAOK2Q9UL54 1235 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 CHD4Q14839 1912 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 NPHP1O15259 732 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 ZAP70P43403 619 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 BLOC1S2Q6QNY1 142 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 TFCP2L1Q9NZI6 479 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 TIAM2Q8IVF5 1701 aa8.15□□□□□ -1.11
ECHDC1-210ENST00000454859 PTH1RQ03431 593 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 FAM182BQ5T319 152 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 SP8Q8IXZ3 490 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 GBP4Q96PP9 640 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 SUGT1Q9Y2Z0 365 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 MAST3O60307 1309 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 DLEC1Q9Y238 1755 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 MYO5AQ9Y4I1 1855 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 CYP2E1P05181 493 aaPredicted RBP8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 HSPD1P10809 573 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 NPR1P16066 1061 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 PHKA1P46020 1223 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 IMMTQ16891 758 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 WDR66Q8TBY9 1149 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 TMX3Q96JJ7 454 aa8.14□□□□□ -1.11
ECHDC1-210ENST00000454859 TCRBV5S4A2TA0A5A2 114 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 DDX11L8A8MPP1 907 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 PDE6AP16499 860 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 RPS6KB1P23443 525 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 HIBADHP31937 336 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 STYK1Q6J9G0 422 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 ZNF804AQ7Z570 1209 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 CCDC85AQ96PX6 553 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 NEK1Q96PY6 1258 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 CAMKK2Q96RR4 588 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 AGXT2Q9BYV1 514 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 NACAP1Q9BZK3 213 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 IL25Q9H293 177 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 STK32BQ9NY57 414 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 RGS17Q9UGC6 210 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 PALD1Q9ULE6 856 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 IRS2Q9Y4H2 1338 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 TAF1P21675 1872 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 FAM177BA6PVY3 158 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 PHF14O94880 888 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 BAG6P46379 1132 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 EVCP57679 992 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 GSTO1P78417 241 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 SLC9C2Q5TAH2 1124 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 CELF1Q92879 486 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 FAM84BQ96KN1 310 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 JAKMIP1Q96N16 626 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 LLPHQ9BRT6 129 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 TMX4Q9H1E5 349 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 CACNA1SQ13698 1873 aa8.13□□□□□ -1.11
ECHDC1-210ENST00000454859 PATL2C9JE40 543 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 CASTP20810 708 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 PDCP20941 246 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 KCNQ4P56696 695 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 ZNF589Q86UQ0 364 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 SLF2Q8IX21 1173 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 RASEFQ8IZ41 740 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 CNNM2Q9H8M5 875 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 GOLGA6L22H0YM25 854 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 GPAA1O43292 621 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 LDHCP07864 332 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 RCAN1P53805 252 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 SCARF1Q14162 830 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 SKOR2Q2VWA4 1001 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 OSBP2Q969R2 916 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 ATP6V1DQ9Y5K8 247 aa8.12□□□□□ -1.11
ECHDC1-210ENST00000454859 IL1R1P14778 569 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 DDR1Q08345 913 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 SLC15A2Q16348 729 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 C3orf67Q6ZVT6 689 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 AIDAQ96BJ3 306 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 EDC3Q96F86 508 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 STRBPQ96SI9 672 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-210ENST00000454859 VPS33BQ9H267 617 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms