RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CERS5Q8N5B7 392 aa12.72□□□□□ -0.37
CLCN4-204ENST00000454850 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
CLCN4-204ENST00000454850 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
CLCN4-204ENST00000454850 EFCC1Q9HA90 598 aa12.72□□□□□ -0.37
CLCN4-204ENST00000454850 CACNA1FO60840 1977 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 NEURL1BA8MQ27 555 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 SNAP23O00161 211 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 ITGA6P23229 1130 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 GJA5P36382 358 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLCN4-204ENST00000454850 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 NBPF12Q5TAG4 269 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-204ENST00000454850 OTUD7BQ6GQQ9 843 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 JAG2Q9Y219 1238 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 PPP2R3BQ9Y5P8 575 aa12.71□□□□□ -0.37
CLCN4-204ENST00000454850 AOX1Q06278 1338 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 MYO1BO43795 1136 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 MYCP01106 439 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-204ENST00000454850 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
CLCN4-204ENST00000454850 CAP1Q01518 475 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 SP3Q02447 781 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
CLCN4-204ENST00000454850 CHRNDQ07001 517 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 SUPT20HL1Q3ZLR7 823 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 TSPYL6Q8N831 410 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-204ENST00000454850 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 ELP3Q9H9T3 547 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 CD209Q9NNX6 404 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 ARAP2Q8WZ64 1704 aa12.7□□□□□ -0.38
CLCN4-204ENST00000454850 RANBP2P49792 3224 aaKnown RBP12.69□□□□□ -0.38
CLCN4-204ENST00000454850 APAF1O14727 1248 aa12.69□□□□□ -0.38
CLCN4-204ENST00000454850 TAF5LO75529 589 aa12.69□□□□□ -0.38
CLCN4-204ENST00000454850 RBM5P52756 815 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLCN4-204ENST00000454850 PTPN18Q99952 460 aa12.69□□□□□ -0.38
CLCN4-204ENST00000454850 STK31Q9BXU1 1019 aa12.69□□□□□ -0.38
CLCN4-204ENST00000454850 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 H7C1W4 665 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 USP2O75604 605 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-204ENST00000454850 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
CLCN4-204ENST00000454850 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 G2E3Q7L622 706 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 PRMT6Q96LA8 375 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-204ENST00000454850 COLQQ9Y215 455 aaPredicted RBP12.68□□□□□ -0.38
CLCN4-204ENST00000454850 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
CLCN4-204ENST00000454850 RASA3Q14644 834 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-204ENST00000454850 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 TSR2Q969E8 191 aaKnown RBP12.67□□□□□ -0.38
CLCN4-204ENST00000454850 OPTNQ96CV9 577 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 CHMP3Q9Y3E7 222 aa12.67□□□□□ -0.38
CLCN4-204ENST00000454850 AK9Q5TCS8 1911 aa12.66□□□□□ -0.38
CLCN4-204ENST00000454850 IRS2Q9Y4H2 1338 aa12.66□□□□□ -0.38
CLCN4-204ENST00000454850 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
CLCN4-204ENST00000454850 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
CLCN4-204ENST00000454850 GCKRQ14397 625 aa12.66□□□□□ -0.38
CLCN4-204ENST00000454850 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
CLCN4-204ENST00000454850 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
CLCN4-204ENST00000454850 PLIN1O60240 522 aa12.65□□□□□ -0.38
CLCN4-204ENST00000454850 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
CLCN4-204ENST00000454850 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
CLCN4-204ENST00000454850 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
CLCN4-204ENST00000454850 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
CLCN4-204ENST00000454850 CCL15-CCL14A0A0B4J2E2 113 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 H0YGN5 161 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
CLCN4-204ENST00000454850 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 CSF1RP07333 972 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 IL1R1P14778 569 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 CASP7P55210 303 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 CCL15Q16663 113 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
CLCN4-204ENST00000454850 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
CLCN4-204ENST00000454850 FKBP5Q13451 457 aaPredicted RBP12.63□□□□□ -0.39
CLCN4-204ENST00000454850 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 VGLL4Q14135 290 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
CLCN4-204ENST00000454850 C15orf52Q6ZUT6 534 aaKnown RBP12.63□□□□□ -0.39
CLCN4-204ENST00000454850 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 ARHGAP39Q9C0H5 1083 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 TDRD3Q9H7E2 651 aaKnown RBP12.63□□□□□ -0.39
CLCN4-204ENST00000454850 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
CLCN4-204ENST00000454850 A0A0C4DFX4 3053 aa12.63□□□□□ -0.39
CLCN4-204ENST00000454850 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 GTF2A2P52657 109 aa12.62□□□□□ -0.39
CLCN4-204ENST00000454850 FKBP1AP62942 108 aaKnown RBP12.62□□□□□ -0.39
CLCN4-204ENST00000454850 FLIIQ13045 1269 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms