RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 IL15P40933 162 aaPredicted RBP12.98□□□□□ -0.33
DDR1-240ENST00000454612 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 CTNNA3Q9UI47 895 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
DDR1-240ENST00000454612 ERBB3P21860 1342 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 IRS4O14654 1257 aaPredicted RBP12.97□□□□□ -0.33
DDR1-240ENST00000454612 ALG1Q9BT22 464 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 E7EWF7 191 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
DDR1-240ENST00000454612 ITGA6P23229 1130 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 METAP2P50579 478 aaKnown RBP eCLIP12.97□□□□□ -0.336e-6■■■■□ 24.8
DDR1-240ENST00000454612 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 PLBD2Q8NHP8 589 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 NAT10Q9H0A0 1025 aaKnown RBP12.97□□□□□ -0.33
DDR1-240ENST00000454612 DDX19AQ9NUU7 478 aaKnown RBP12.97□□□□□ -0.33
DDR1-240ENST00000454612 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
DDR1-240ENST00000454612 PXDNQ92626 1479 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 TERF1P54274 439 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
DDR1-240ENST00000454612 IL2RBP14784 551 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 TAF3Q5VWG9 929 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 MAGEB6Q8N7X4 407 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 STAMQ92783 540 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.33
DDR1-240ENST00000454612 SKILP12757 684 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 AFMP43652 599 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 NGLY1Q96IV0 654 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
DDR1-240ENST00000454612 C8orf37Q96NL8 207 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.33
DDR1-240ENST00000454612 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
DDR1-240ENST00000454612 EXOC5O00471 708 aa12.96□□□□□ -0.34
DDR1-240ENST00000454612 GPAA1O43292 621 aa12.96□□□□□ -0.34
DDR1-240ENST00000454612 MCM5P33992 734 aa12.96□□□□□ -0.34
DDR1-240ENST00000454612 ARMT1Q9H993 441 aa12.96□□□□□ -0.34
DDR1-240ENST00000454612 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.34
DDR1-240ENST00000454612 STX17P56962 302 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 ATP2B2Q01814 1243 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 COBLO75128 1261 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
DDR1-240ENST00000454612 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 CERS3Q8IU89 383 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 HOXB7P09629 217 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 ATP5JP18859 108 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 IRX3P78415 501 aaPredicted RBP12.95□□□□□ -0.34
DDR1-240ENST00000454612 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 TTC14Q96N46 770 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 KCNJ14Q9UNX9 436 aa12.95□□□□□ -0.34
DDR1-240ENST00000454612 FGAP02671 866 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 LTBP4Q8N2S1 1624 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 TOB2Q14106 344 aaPredicted RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 NAA30Q147X3 362 aaPredicted RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 ANO10Q9NW15 660 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 ZNF500O60304 480 aaPredicted RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 MARCH6O60337 910 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 GREM2Q9H772 168 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 PLIN2Q99541 437 aa12.94□□□□□ -0.34
DDR1-240ENST00000454612 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
DDR1-240ENST00000454612 M0R2C6 588 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 SCARF1Q14162 830 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 BABAM1Q9NWV8 329 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 MBD4O95243 580 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
DDR1-240ENST00000454612 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
DDR1-240ENST00000454612 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 CLIC6Q96NY7 704 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDR1-240ENST00000454612 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 SPTLC2O15270 562 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
DDR1-240ENST00000454612 LTN1O94822 1766 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
DDR1-240ENST00000454612 SFPQP23246 707 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDR1-240ENST00000454612 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
DDR1-240ENST00000454612 EEF2KMTQ96G04 330 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms