RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 HMGB1P09429 215 aaKnown RBP25.46■■□□□ 1.67
SH3D21-201ENST00000453908 HSPA1LP34931 641 aa25.46■■□□□ 1.67
SH3D21-201ENST00000453908 FERMT3Q86UX7 667 aa25.46■■□□□ 1.67
SH3D21-201ENST00000453908 NAP1L2Q9ULW6 460 aaPredicted RBP25.46■■□□□ 1.67
SH3D21-201ENST00000453908 CDC37L1Q7L3B6 337 aa25.45■■□□□ 1.67
SH3D21-201ENST00000453908 TAF1P21675 1872 aa25.45■■□□□ 1.66
SH3D21-201ENST00000453908 AFF2P51816 1311 aa25.45■■□□□ 1.66
SH3D21-201ENST00000453908 FIBPO43427 364 aa25.45■■□□□ 1.66
SH3D21-201ENST00000453908 PDE6AP16499 860 aa25.44■■□□□ 1.66
SH3D21-201ENST00000453908 IMMTQ16891 758 aaKnown RBP25.44■■□□□ 1.66
SH3D21-201ENST00000453908 ZSCAN25Q6NSZ9 544 aa25.44■■□□□ 1.66
SH3D21-201ENST00000453908 IQSEC3Q9UPP2 1182 aaPredicted RBP25.44■■□□□ 1.66
SH3D21-201ENST00000453908 THSD7AQ9UPZ6 1657 aa25.44■■□□□ 1.66
SH3D21-201ENST00000453908 EXOSC10Q01780 885 aaKnown RBP25.44■■□□□ 1.66
SH3D21-201ENST00000453908 DNM1Q05193 864 aaKnown RBP25.44■■□□□ 1.66
SH3D21-201ENST00000453908 SCRN1Q12765 414 aa25.44■■□□□ 1.66
SH3D21-201ENST00000453908 RTL9Q8NET4 1388 aa25.43■■□□□ 1.66
SH3D21-201ENST00000453908 RPS6KA4O75676 772 aa25.43■■□□□ 1.66
SH3D21-201ENST00000453908 DDX11Q96FC9 970 aa25.43■■□□□ 1.66
SH3D21-201ENST00000453908 CDC5LQ99459 802 aaKnown RBP25.43■■□□□ 1.66
SH3D21-201ENST00000453908 CTNNA3Q9UI47 895 aa25.43■■□□□ 1.66
SH3D21-201ENST00000453908 PPFIA3O75145 1194 aa25.43■■□□□ 1.66
SH3D21-201ENST00000453908 GPHNQ9NQX3 736 aaPredicted RBP25.43■■□□□ 1.66
SH3D21-201ENST00000453908 ZNF831Q5JPB2 1677 aa25.43■■□□□ 1.66
SH3D21-201ENST00000453908 PHF14O94880 888 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 APPP05067 770 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 NARFQ9UHQ1 456 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 LAMB2P55268 1798 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 ZPR1O75312 459 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 MBD3O95983 291 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 CCT2P78371 535 aaKnown RBP25.42■■□□□ 1.66
SH3D21-201ENST00000453908 FAM173BQ6P4H8 233 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 ANKRD18AQ8IVF6 992 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 FAM43AQ8N2R8 423 aa25.42■■□□□ 1.66
SH3D21-201ENST00000453908 MAGEB6Q8N7X4 407 aa25.41■■□□□ 1.66
SH3D21-201ENST00000453908 ISY1Q9ULR0 285 aaKnown RBP25.41■■□□□ 1.66
SH3D21-201ENST00000453908 RTCBQ9Y3I0 505 aaKnown RBP25.41■■□□□ 1.66
SH3D21-201ENST00000453908 ATP6V1DQ9Y5K8 247 aa25.41■■□□□ 1.66
SH3D21-201ENST00000453908 UBE3CQ15386 1083 aa25.41■■□□□ 1.66
SH3D21-201ENST00000453908 CERKQ8TCT0 537 aa25.41■■□□□ 1.66
SH3D21-201ENST00000453908 SETDB2Q96T68 719 aa25.41■■□□□ 1.66
SH3D21-201ENST00000453908 ARAP2Q8WZ64 1704 aa25.4■■□□□ 1.66
SH3D21-201ENST00000453908 TCRBV5S4A2TA0A5A2 114 aa25.4■■□□□ 1.66
SH3D21-201ENST00000453908 RC3H1Q5TC82 1133 aaKnown RBP25.4■■□□□ 1.66
SH3D21-201ENST00000453908 CELF1Q92879 486 aaKnown RBP25.4■■□□□ 1.66
SH3D21-201ENST00000453908 NCOA5Q9HCD5 579 aaKnown RBP25.4■■□□□ 1.66
SH3D21-201ENST00000453908 SYCE3A1L190 88 aa25.39■■□□□ 1.66
SH3D21-201ENST00000453908 ZNF213O14771 459 aa25.39■■□□□ 1.66
SH3D21-201ENST00000453908 ZNF445P59923 1031 aa25.39■■□□□ 1.66
SH3D21-201ENST00000453908 NBPF5PQ86XG9 351 aaPredicted RBP25.39■■□□□ 1.66
SH3D21-201ENST00000453908 NHSQ6T4R5 1651 aa25.39■■□□□ 1.66
SH3D21-201ENST00000453908 ARHGEF1Q92888 912 aaKnown RBP25.39■■□□□ 1.66
SH3D21-201ENST00000453908 DENND2AQ9ULE3 1009 aa25.39■■□□□ 1.66
SH3D21-201ENST00000453908 PDCP20941 246 aa25.38■■□□□ 1.65
SH3D21-201ENST00000453908 SF3B3Q15393 1217 aaKnown RBP25.38■■□□□ 1.65
SH3D21-201ENST00000453908 GYG1P46976 350 aa25.38■■□□□ 1.65
SH3D21-201ENST00000453908 SEPT12Q8IYM1 358 aa25.38■■□□□ 1.65
SH3D21-201ENST00000453908 AIDAQ96BJ3 306 aa25.38■■□□□ 1.65
SH3D21-201ENST00000453908 PFKFB2O60825 505 aa25.37■■□□□ 1.65
SH3D21-201ENST00000453908 FOSBP53539 338 aa25.37■■□□□ 1.65
SH3D21-201ENST00000453908 AGXT2Q9BYV1 514 aa25.37■■□□□ 1.65
SH3D21-201ENST00000453908 SCN7AQ01118 1682 aa25.37■■□□□ 1.65
SH3D21-201ENST00000453908 MAP3K12Q12852 859 aa25.37■■□□□ 1.65
SH3D21-201ENST00000453908 ATRNO75882 1429 aa25.37■■□□□ 1.65
SH3D21-201ENST00000453908 TMEM87AQ8NBN3 555 aa25.36■■□□□ 1.65
SH3D21-201ENST00000453908 NBPF3Q9H094 633 aa25.36■■□□□ 1.65
SH3D21-201ENST00000453908 PRC1O43663 620 aa25.35■■□□□ 1.65
SH3D21-201ENST00000453908 MBD4O95243 580 aa25.35■■□□□ 1.65
SH3D21-201ENST00000453908 CTDNEP1O95476 244 aa25.35■■□□□ 1.65
SH3D21-201ENST00000453908 PDIA3P30101 505 aaKnown RBP25.35■■□□□ 1.65
SH3D21-201ENST00000453908 RALYLQ86SE5 291 aaKnown RBP25.35■■□□□ 1.65
SH3D21-201ENST00000453908 NKX2-3Q8TAU0 364 aa25.35■■□□□ 1.65
SH3D21-201ENST00000453908 STRBPQ96SI9 672 aaKnown RBP25.35■■□□□ 1.65
SH3D21-201ENST00000453908 ARMT1Q9H993 441 aa25.35■■□□□ 1.65
SH3D21-201ENST00000453908 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
SH3D21-201ENST00000453908 MINPP1Q9UNW1 487 aa25.35■■□□□ 1.65
SH3D21-201ENST00000453908 RAB11FIP4Q86YS3 637 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 TBC1D10CQ8IV04 446 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 NSUN7Q8NE18 718 aaKnown RBP25.34■■□□□ 1.65
SH3D21-201ENST00000453908 NPHP1O15259 732 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 MB21D2Q8IYB1 491 aaPredicted RBP25.34■■□□□ 1.65
SH3D21-201ENST00000453908 FAM184AQ8NB25 1140 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 NCOA7Q8NI08 942 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 NYXQ9GZU5 481 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 LRP2BPQ9P2M1 347 aa25.34■■□□□ 1.65
SH3D21-201ENST00000453908 CASZ1Q86V15 1759 aa25.33■■□□□ 1.65
SH3D21-201ENST00000453908 ANTXR2P58335 489 aa25.33■■□□□ 1.65
SH3D21-201ENST00000453908 FAM196AQ6ZSG2 479 aa25.33■■□□□ 1.65
SH3D21-201ENST00000453908 NLRP3Q96P20 1036 aa25.33■■□□□ 1.65
SH3D21-201ENST00000453908 PTPDC1A2A3K4 754 aa25.33■■□□□ 1.64
SH3D21-201ENST00000453908 MCM5P33992 734 aa25.33■■□□□ 1.64
SH3D21-201ENST00000453908 RFC4P35249 363 aa25.33■■□□□ 1.64
SH3D21-201ENST00000453908 SLC10A5Q5PT55 438 aa25.33■■□□□ 1.64
SH3D21-201ENST00000453908 LRRC4BQ9NT99 713 aa25.33■■□□□ 1.64
SH3D21-201ENST00000453908 ABCF2Q9UG63 623 aa25.33■■□□□ 1.64
SH3D21-201ENST00000453908 MIGA1Q8NAN2 632 aa25.32■■□□□ 1.64
SH3D21-201ENST00000453908 TRPC5Q9UL62 973 aaPredicted RBP25.32■■□□□ 1.64
SH3D21-201ENST00000453908 INCENPQ9NQS7 918 aa25.32■■□□□ 1.64
SH3D21-201ENST00000453908 H3BQV1 296 aa25.31■■□□□ 1.64
SH3D21-201ENST00000453908 PRKAB2O43741 272 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms