RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 EGFRP00533 1210 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 RSBN1LQ6PCB5 846 aaPredicted RBP11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
CDC42EP3-203ENST00000453555 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
CDC42EP3-203ENST00000453555 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
CDC42EP3-203ENST00000453555 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
CDC42EP3-203ENST00000453555 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
CDC42EP3-203ENST00000453555 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
CDC42EP3-203ENST00000453555 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
CDC42EP3-203ENST00000453555 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
CDC42EP3-203ENST00000453555 PGAP2Q9UHJ9 254 aa11.87□□□□□ -0.51
CDC42EP3-203ENST00000453555 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
CDC42EP3-203ENST00000453555 GTF2IP78347 998 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 KIF4BQ2VIQ3 1234 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 LRRC24Q50LG9 513 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 DACT2Q5SW24 774 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 GMLQ99445 158 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 ASTN2O75129 1339 aaPredicted RBP11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
CDC42EP3-203ENST00000453555 IPO8O15397 1037 aaKnown RBP11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 USP17L8P0C7I0 530 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 STRIP1Q5VSL9 837 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 CST9Q5W186 159 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 DLK2Q6UY11 383 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 DCPSQ96C86 337 aaKnown RBP11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 ZNF408Q9H9D4 720 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 MYH13Q9UKX3 1938 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
CDC42EP3-203ENST00000453555 CNTNAP1P78357 1384 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 TRIM27P14373 513 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 SCARF1Q14162 830 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 C15orf52Q6ZUT6 534 aaKnown RBP11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 MEIS3Q99687 375 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 MYOZ2Q9NPC6 264 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 ZNF609O15014 1411 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 MROH5Q6ZUA9 1318 aa11.84□□□□□ -0.51
CDC42EP3-203ENST00000453555 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 GYG1P46976 350 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 VEGFBP49765 207 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 DEFB115Q30KQ5 88 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 KIAA0825Q8IV33 1275 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 GGA3Q9NZ52 723 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 MYO3BQ8WXR4 1341 aa11.83□□□□□ -0.52
CDC42EP3-203ENST00000453555 POTEMA6NI47 508 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 IL1R1P14778 569 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 GRM1Q13255 1194 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 ANGEL2Q5VTE6 544 aaKnown RBP11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 OGFOD1Q8N543 542 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 SIL1Q9H173 461 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 SCAF8Q9UPN6 1271 aaKnown RBP11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
CDC42EP3-203ENST00000453555 RASSF10A6NK89 507 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 EYA2O00167 538 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 PDE8BO95263 885 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 GNAI3P08754 354 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 NBPF9Q3BBW0 867 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 VGLL2Q8N8G2 317 aa11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
CDC42EP3-203ENST00000453555 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms