RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ATP2B2Q01814 1243 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 MAP9Q49MG5 647 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 ZNF394Q53GI3 561 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 PLEKHG4Q58EX7 1191 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 CCSAPQ6IQ19 270 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 PODNQ7Z5L7 613 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 SYT9Q86SS6 491 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 COL26A1Q96A83 441 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 SCARF2Q96GP6 870 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 RNPC3Q96LT9 517 aaKnown RBP5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 SLC30A3Q99726 388 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 RBCK1Q9BYM8 510 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 JADE2Q9NQC1 790 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 LRFN2Q9ULH4 789 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 PCDHGB7Q9Y5F8 929 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 NDUFB5O43674 189 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 EPB42P16452 691 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 BDNFP23560 247 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 IDH3AP50213 366 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 CHMP4BP1P59074 171 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 PLCB3Q01970 1234 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 KCNMA1Q12791 1236 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 NEUROD1Q13562 356 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 C11orf91Q3C1V1 193 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 WDR75Q8IWA0 830 aaKnown RBP5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 SRPK1Q96SB4 655 aaKnown RBP5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 MPHOSPH6Q99547 160 aaKnown RBP5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 IER2Q9BTL4 223 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 RRAGCQ9HB90 399 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 RNF19AQ9NV58 838 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 SFMBT1Q9UHJ3 866 aa5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 DDX41Q9UJV9 622 aaKnown RBP5.7□□□□□ -1.5
HMGB3P21-201ENST00000452483 ANP32CO43423 234 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 PTCD1O75127 700 aaKnown RBP5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 SIN3BO75182 1162 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 CDC45O75419 566 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 LDHAP00338 332 aaKnown RBP5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 PTMAP06454 111 aaKnown RBP5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 INPP5BP32019 993 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 IRS1P35568 1242 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 GSK3AP49840 483 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 ARSDP51689 593 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 SNRPNP63162 240 aaKnown RBP5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 HDAC1Q13547 482 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 ZRSR2Q15696 482 aaKnown RBP5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 COX20Q5RI15 118 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 XP32Q5T750 250 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 NBPF6Q5VWK0 638 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 C16orf46Q6P387 395 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 CHSY3Q70JA7 882 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 MKL1Q969V6 931 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 IL17RAQ96F46 866 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 NBPF4Q96M43 638 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 EID1Q9Y6B2 187 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 CNTNAP5Q8WYK1 1306 aa5.69□□□□□ -1.5
HMGB3P21-201ENST00000452483 ELOA3CA0A087WX78 387 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 ELOA3DA6NLF2 546 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 PHF20L1A8MW92 1017 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 KIF3BO15066 747 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 ZNF500O60304 480 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 HOXB4P17483 251 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 DGKGP49619 791 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 DHX8Q14562 1220 aaKnown RBP5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 ELOA3BQ3SY89 546 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 ZNF280DQ6N043 979 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 KANK3Q6NY19 840 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 CAPN12Q6ZSI9 719 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 ELOA3Q8NG57 546 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 TNFRSF25Q93038 417 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 BHMTQ93088 406 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 MDFIQ99750 246 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 SAP130Q9H0E3 1048 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 HOMER2Q9NSB8 354 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 MKL2Q9ULH7 1088 aa5.68□□□□□ -1.5
HMGB3P21-201ENST00000452483 MICAL2O94851 1124 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 FAM13AO94988 1023 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 RASSF7Q02833 373 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 EHHADHQ08426 723 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 SERINC3Q13530 473 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 AAMPQ13685 434 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 MYBPC2Q14324 1141 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 NAA30Q147X3 362 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 BRD3Q15059 726 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 PPP4R4Q6NUP7 873 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 TREML1Q86YW5 311 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 BEND7Q8N7W2 519 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 RELTQ969Z4 430 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 IFT43Q96FT9 208 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 BTBD6Q96KE9 485 aa5.67□□□□□ -1.5
HMGB3P21-201ENST00000452483 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 TNFRSF10BO14763 440 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 CAND2O75155 1236 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 KRT18P05783 430 aaKnown RBP5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 VIL1P09327 827 aaKnown RBP5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 ATF4P18848 351 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 CD53P19397 219 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms