RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 PGAP2Q9UHJ9 254 aa10.94□□□□□ -0.66
COL8A1-203ENST00000452013 ZBTB22O15209 634 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 POTEJP0CG39 1038 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 HIRAP54198 1017 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-203ENST00000452013 KIF4BQ2VIQ3 1234 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 CCDC158Q5M9N0 1113 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 CCDC102BQ68D86 513 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 DCPSQ96C86 337 aaKnown RBP10.93□□□□□ -0.66
COL8A1-203ENST00000452013 MYOZ2Q9NPC6 264 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 DENND2AQ9ULE3 1009 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 IQSEC3Q9UPP2 1182 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-203ENST00000452013 SBF1O95248 1867 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
COL8A1-203ENST00000452013 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 TAF1P21675 1872 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 SHTN1A0MZ66 631 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 NEFLP07196 543 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 HSPA6P17066 643 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 SCARF1Q14162 830 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 DLGAP5Q15398 846 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 MAP1SQ66K74 1059 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-203ENST00000452013 CDC37L1Q7L3B6 337 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 SIRT2Q8IXJ6 389 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 CERS5Q8N5B7 392 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 KIF1BPQ96EK5 621 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 CRBNQ96SW2 442 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 ZNF609O15014 1411 aa10.92□□□□□ -0.66
COL8A1-203ENST00000452013 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-203ENST00000452013 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-203ENST00000452013 ADORA1P30542 326 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 PHKA1P46020 1223 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 APLP1P51693 650 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 ERICH6BQ5W0A0 696 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 CLASRPQ8N2M8 674 aaKnown RBP10.91□□□□□ -0.66
COL8A1-203ENST00000452013 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
COL8A1-203ENST00000452013 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 MRIQ9BWK5 157 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 TTF2Q9UNY4 1162 aaKnown RBP10.91□□□□□ -0.66
COL8A1-203ENST00000452013 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
COL8A1-203ENST00000452013 MYO1BO43795 1136 aa10.9□□□□□ -0.66
COL8A1-203ENST00000452013 RBM5P52756 815 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL8A1-203ENST00000452013 HDLBPQ00341 1268 aaKnown RBP10.9□□□□□ -0.66
COL8A1-203ENST00000452013 TTC39AQ5SRH9 613 aa10.9□□□□□ -0.66
COL8A1-203ENST00000452013 SPTY2D1Q68D10 685 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-203ENST00000452013 MTMR14Q8NCE2 650 aa10.9□□□□□ -0.66
COL8A1-203ENST00000452013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-203ENST00000452013 MYH3P11055 1940 aa10.9□□□□□ -0.67
COL8A1-203ENST00000452013 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 MAST3O60307 1309 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 APBB1O00213 710 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 WNT10BO00744 389 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 EGFRP00533 1210 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 IFIT2P09913 472 aaKnown RBP10.89□□□□□ -0.67
COL8A1-203ENST00000452013 CFAP100Q494V2 611 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 EAF2Q96CJ1 260 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-203ENST00000452013 DBNDD2Q9BQY9 259 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 CCDC8Q9H0W5 538 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-203ENST00000452013 DCTPP1Q9H773 170 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 SERPINA10Q9UK55 444 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 PCDHB15Q9Y5E8 787 aa10.89□□□□□ -0.67
COL8A1-203ENST00000452013 PDS5AQ29RF7 1337 aaKnown RBP10.88□□□□□ -0.67
COL8A1-203ENST00000452013 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
COL8A1-203ENST00000452013 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
COL8A1-203ENST00000452013 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 ANGEL2Q5VTE6 544 aaKnown RBP10.88□□□□□ -0.67
COL8A1-203ENST00000452013 KRT26Q7Z3Y9 468 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 AACSQ86V21 672 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-203ENST00000452013 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 HMG20BQ9P0W2 317 aa10.88□□□□□ -0.67
COL8A1-203ENST00000452013 PASKQ96RG2 1323 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 SALL1Q9NSC2 1324 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 TMEM88BA6NKF7 163 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 IGSF3O75054 1194 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 ARID4AP29374 1257 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-203ENST00000452013 CRKP46108 304 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 RASGRF1Q13972 1273 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 HHIPL2Q6UWX4 724 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 SPATA5Q8NB90 893 aa10.87□□□□□ -0.67
COL8A1-203ENST00000452013 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-203ENST00000452013 PRMT6Q96LA8 375 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-203ENST00000452013 GLIS2Q9BZE0 524 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-203ENST00000452013 RWDD1Q9H446 243 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms