RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 DEFB115Q30KQ5 88 aa10.99□□□□□ -0.65
RFX3-209ENST00000451859 DLK2Q6UY11 383 aa10.99□□□□□ -0.65
RFX3-209ENST00000451859 CDCA7LQ96GN5 454 aa10.99□□□□□ -0.65
RFX3-209ENST00000451859 C9orf78Q9NZ63 289 aaPredicted RBP10.99□□□□□ -0.65
RFX3-209ENST00000451859 MED23Q9ULK4 1368 aa10.99□□□□□ -0.65
RFX3-209ENST00000451859 THSD7BQ9C0I4 1608 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 E9PSI1 815 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 CSF1RP07333 972 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 RPS12P25398 132 aaKnown RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 FOXO4P98177 505 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 IFIT5Q13325 482 aaKnown RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 KIF4BQ2VIQ3 1234 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 CST9Q5W186 159 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 LMBR1LQ6UX01 489 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 USP48Q86UV5 1035 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 MRPL50Q8N5N7 158 aaKnown RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 DPF2Q92785 391 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 SRCIN1Q9C0H9 1055 aa10.98□□□□□ -0.65
RFX3-209ENST00000451859 ASTN2O75129 1339 aaPredicted RBP10.98□□□□□ -0.65
RFX3-209ENST00000451859 AKAP11Q9UKA4 1901 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 ADM5C9JUS6 153 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 SNAP23O00161 211 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 TAF5LO75529 589 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
RFX3-209ENST00000451859 CHRNDQ07001 517 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 SLFN5Q08AF3 891 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 CYP4F22Q6NT55 531 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
RFX3-209ENST00000451859 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 TXNRD3Q86VQ6 643 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 SSH1Q8WYL5 1049 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 ZNF804BA4D1E1 1349 aa10.97□□□□□ -0.65
RFX3-209ENST00000451859 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
RFX3-209ENST00000451859 ARAP2Q8WZ64 1704 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 PLIN1O60240 522 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 ALDH1L1O75891 902 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 CCDC57Q2TAC2 916 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 CDC37L1Q7L3B6 337 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 KRT26Q7Z3Y9 468 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 PODNQ7Z5L7 613 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 ZC3H15Q8WU90 426 aaKnown RBP10.96□□□□□ -0.65
RFX3-209ENST00000451859 AIDAQ96BJ3 306 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.65
RFX3-209ENST00000451859 SUCLG2Q96I99 432 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 CAPNS2Q96L46 248 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 GGA3Q9NZ52 723 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 PGAP2Q9UHJ9 254 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
RFX3-209ENST00000451859 CASP8AP2Q9UKL3 1982 aa10.96□□□□□ -0.66
RFX3-209ENST00000451859 CCER2I3L3R5 266 aa10.95□□□□□ -0.66
RFX3-209ENST00000451859 FOXN1O15353 648 aa10.95□□□□□ -0.66
RFX3-209ENST00000451859 NBPF7P0C2Y1 421 aaPredicted RBP10.95□□□□□ -0.66
RFX3-209ENST00000451859 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
RFX3-209ENST00000451859 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
RFX3-209ENST00000451859 KHSRPQ92945 711 aaKnown RBP eCLIP10.95□□□□□ -0.663e-11■■■■■ 27.7
RFX3-209ENST00000451859 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
RFX3-209ENST00000451859 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
RFX3-209ENST00000451859 TLL2Q9Y6L7 1015 aa10.95□□□□□ -0.66
RFX3-209ENST00000451859 PTPRCP08575 1304 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 AOC2O75106 756 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 ECE1P42892 770 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 SCARF1Q14162 830 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 ANGEL2Q5VTE6 544 aaKnown RBP10.94□□□□□ -0.66
RFX3-209ENST00000451859 LDHAL6AQ6ZMR3 332 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 COA1Q9GZY4 146 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 MYOZ2Q9NPC6 264 aa10.94□□□□□ -0.66
RFX3-209ENST00000451859 ZNF609O15014 1411 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 ZNF280AP59817 542 aaPredicted RBP10.93□□□□□ -0.66
RFX3-209ENST00000451859 GTF2IP78347 998 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 SAPCD2Q86UD0 394 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 GMLQ99445 158 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 BICC1Q9H694 974 aaKnown RBP10.93□□□□□ -0.66
RFX3-209ENST00000451859 JAG2Q9Y219 1238 aa10.93□□□□□ -0.66
RFX3-209ENST00000451859 F8W031 263 aaPredicted RBP10.92□□□□□ -0.66
RFX3-209ENST00000451859 SASH1O94885 1247 aa10.92□□□□□ -0.66
RFX3-209ENST00000451859 HUNKP57058 714 aa10.92□□□□□ -0.66
RFX3-209ENST00000451859 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
RFX3-209ENST00000451859 STRIP1Q5VSL9 837 aa10.92□□□□□ -0.66
RFX3-209ENST00000451859 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
RFX3-209ENST00000451859 KAZALD1Q96I82 304 aa10.92□□□□□ -0.66
RFX3-209ENST00000451859 PUS3Q9BZE2 481 aaKnown RBP10.92□□□□□ -0.66
RFX3-209ENST00000451859 CD209Q9NNX6 404 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms