RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 NIP7Q9Y221 180 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP46-202ENST00000451218 ZMYM6O95789 1325 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 GAS2L3Q86XJ1 694 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 ZBTB12Q9Y330 459 aaPredicted RBP7.95□□□□□ -1.14
USP46-202ENST00000451218 MYH1P12882 1939 aa7.95□□□□□ -1.14
USP46-202ENST00000451218 CCDC57Q2TAC2 916 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 RNF113AO15541 343 aaKnown RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 CASTP20810 708 aaKnown RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 CHRNDQ07001 517 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 FSD1Q9BTV5 496 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 HPS5Q9UPZ3 1129 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 ATP2B3Q16720 1220 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 MB21D2Q8IYB1 491 aaPredicted RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 HELBQ8NG08 1087 aaPredicted RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 TRPC5Q9UL62 973 aaPredicted RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 PUM3Q15397 648 aaKnown RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 CASC1Q6TDU7 716 aa7.94□□□□□ -1.14
USP46-202ENST00000451218 ILDR1Q86SU0 546 aaPredicted RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
USP46-202ENST00000451218 ANKRD18BA2A2Z9 1011 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 NFIXQ14938 502 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 LDHAL6AQ6ZMR3 332 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 TBC1D10CQ8IV04 446 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 SHISA4Q96DD7 197 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 TCEANC2Q96MN5 208 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
USP46-202ENST00000451218 DEKP35659 375 aaKnown RBP7.93□□□□□ -1.14
USP46-202ENST00000451218 LPIN2Q92539 896 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 GPHNQ9NQX3 736 aaPredicted RBP7.93□□□□□ -1.14
USP46-202ENST00000451218 TMEM87AQ8NBN3 555 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 SMARCC2Q8TAQ2 1214 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 GPATCH3Q96I76 525 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 DIAPH3Q9NSV4 1193 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 CCNL1Q9UK58 526 aaPredicted RBP7.93□□□□□ -1.14
USP46-202ENST00000451218 HIP1O00291 1037 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 POLRMTO00411 1230 aaKnown RBP7.93□□□□□ -1.14
USP46-202ENST00000451218 BCAMP50895 628 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 FBXO33Q7Z6M2 555 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
USP46-202ENST00000451218 PDS5AQ29RF7 1337 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 IFIT1P09914 478 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 ADD1P35611 737 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 JAKMIP1Q96N16 626 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 RIOK1Q9BRS2 568 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 MYH8P13535 1937 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 E7EWF7 191 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 GRIK5Q16478 980 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 FAM84BQ96KN1 310 aaPredicted RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 QTRT2Q9H974 415 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 MKRN1Q9UHC7 482 aaKnown RBP7.92□□□□□ -1.14
USP46-202ENST00000451218 MTMR6Q9Y217 621 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 CHMP3Q9Y3E7 222 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 GNPATO15228 680 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 FGAP02671 866 aa7.92□□□□□ -1.14
USP46-202ENST00000451218 FDPSP14324 419 aaKnown RBP7.91□□□□□ -1.14
USP46-202ENST00000451218 SCRN1Q12765 414 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 STRBPQ96SI9 672 aaKnown RBP7.91□□□□□ -1.14
USP46-202ENST00000451218 CWC22Q9HCG8 908 aaKnown RBP7.91□□□□□ -1.14
USP46-202ENST00000451218 CEP126Q9P2H0 1117 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 NEDD4P46934 1319 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 ST18O60284 1047 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 PRR5LQ6MZQ0 368 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 LIMCH1Q9UPQ0 1083 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 PDE6AP16499 860 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 MCM2P49736 904 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 UBE3CQ15386 1083 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 METTL24Q5JXM2 366 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 CCDC24Q8N4L8 307 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 SPATA5Q8NB90 893 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 APPBP2Q92624 585 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 NEUROD6Q96NK8 337 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 INCENPQ9NQS7 918 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 FAM217BQ9NTX9 383 aaPredicted RBP7.91□□□□□ -1.14
USP46-202ENST00000451218 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 AKAP2Q9Y2D5 859 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 GSG1L2A8MUP6 293 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 CYB5R4Q7L1T6 521 aa7.91□□□□□ -1.14
USP46-202ENST00000451218 FGRP09769 529 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 SYT1P21579 422 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 GSE1Q14687 1217 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 NECAB1Q8N987 351 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 GTF3C6Q969F1 213 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 WDR70Q9NW82 654 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 CCDC9Q9Y3X0 531 aaKnown RBP7.9□□□□□ -1.14
USP46-202ENST00000451218 PNPLA7Q6ZV29 1317 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 ZNF532Q9HCE3 1301 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 STK25O00506 426 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 PAPPA2Q9BXP8 1791 aa7.9□□□□□ -1.14
USP46-202ENST00000451218 GPAA1O43292 621 aa7.9□□□□□ -1.15
USP46-202ENST00000451218 EIF5BO60841 1220 aaKnown RBP7.9□□□□□ -1.15
USP46-202ENST00000451218 RUFY2Q8WXA3 655 aa7.9□□□□□ -1.15
USP46-202ENST00000451218 PDRG1Q9NUG6 133 aa7.9□□□□□ -1.15
USP46-202ENST00000451218 C15orf52Q6ZUT6 534 aaKnown RBP7.9□□□□□ -1.15
USP46-202ENST00000451218 BBXQ8WY36 941 aaPredicted RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms