RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
LINC01961-201ENST00000449954 DEFB123Q8N688 67 aa10.59□□□□□ -0.71
LINC01961-201ENST00000449954 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
LINC01961-201ENST00000449954 PCDHGA10Q9Y5H3 936 aa10.59□□□□□ -0.71
LINC01961-201ENST00000449954 MUC3AQ02505 3323 aa10.59□□□□□ -0.71
LINC01961-201ENST00000449954 TK2O00142 265 aa10.58□□□□□ -0.72
LINC01961-201ENST00000449954 ECE2O60344 883 aa10.58□□□□□ -0.72
LINC01961-201ENST00000449954 VIL1P09327 827 aaKnown RBP10.58□□□□□ -0.72
LINC01961-201ENST00000449954 ZBTB48P10074 688 aaPredicted RBP10.58□□□□□ -0.72
LINC01961-201ENST00000449954 GPTP24298 496 aa10.58□□□□□ -0.72
LINC01961-201ENST00000449954 GRAPQ13588 217 aa10.58□□□□□ -0.72
LINC01961-201ENST00000449954 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
LINC01961-201ENST00000449954 ARMC9Q7Z3E5 817 aa10.58□□□□□ -0.72
LINC01961-201ENST00000449954 GRAPLQ8TC17 118 aaPredicted RBP10.58□□□□□ -0.72
LINC01961-201ENST00000449954 ZNF646O15015 1829 aaPredicted RBP10.57□□□□□ -0.72
LINC01961-201ENST00000449954 SLC10A5Q5PT55 438 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 DDX46Q7L014 1031 aaKnown RBP10.57□□□□□ -0.72
LINC01961-201ENST00000449954 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 AGBL3Q8NEM8 1001 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 NKX2-3Q8TAU0 364 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 EYA3Q99504 573 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 PTCH2Q9Y6C5 1203 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 ERBB4Q15303 1308 aa10.57□□□□□ -0.72
LINC01961-201ENST00000449954 IGF2BP3O00425 579 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC01961-201ENST00000449954 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
LINC01961-201ENST00000449954 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
LINC01961-201ENST00000449954 CRHR2Q13324 411 aa10.56□□□□□ -0.72
LINC01961-201ENST00000449954 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
LINC01961-201ENST00000449954 MYOZ2Q9NPC6 264 aa10.56□□□□□ -0.72
LINC01961-201ENST00000449954 LAMB2P55268 1798 aa10.56□□□□□ -0.72
LINC01961-201ENST00000449954 LDLRAD1Q5T700 205 aa10.55□□□□□ -0.72
LINC01961-201ENST00000449954 DDX12PQ92771 950 aa10.55□□□□□ -0.72
LINC01961-201ENST00000449954 SHISA4Q96DD7 197 aa10.55□□□□□ -0.72
LINC01961-201ENST00000449954 UTP14AQ9BVJ6 771 aaKnown RBP10.55□□□□□ -0.72
LINC01961-201ENST00000449954 SCN9AQ15858 1988 aa10.55□□□□□ -0.72
LINC01961-201ENST00000449954 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
LINC01961-201ENST00000449954 PSME4Q14997 1843 aa10.54□□□□□ -0.72
LINC01961-201ENST00000449954 WTIPA6NIX2 430 aaPredicted RBP10.54□□□□□ -0.72
LINC01961-201ENST00000449954 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
LINC01961-201ENST00000449954 RSBN1LQ6PCB5 846 aaPredicted RBP10.54□□□□□ -0.72
LINC01961-201ENST00000449954 GIGYF2Q6Y7W6 1299 aaKnown RBP10.54□□□□□ -0.72
LINC01961-201ENST00000449954 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
LINC01961-201ENST00000449954 KCNQ5Q9NR82 932 aa10.54□□□□□ -0.72
LINC01961-201ENST00000449954 MTMR10Q9NXD2 777 aa10.54□□□□□ -0.72
LINC01961-201ENST00000449954 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
LINC01961-201ENST00000449954 TAF1P21675 1872 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 UNCXA6NJT0 531 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 SPDYE16A6NNV3 312 aaPredicted RBP10.53□□□□□ -0.72
LINC01961-201ENST00000449954 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
LINC01961-201ENST00000449954 COL9A1P20849 921 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 PRAMEF18Q5VWM3 479 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 TTLL7Q6ZT98 887 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 NGEFQ8N5V2 710 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 VPS9D1Q9Y2B5 631 aa10.53□□□□□ -0.72
LINC01961-201ENST00000449954 COL1A1P02452 1464 aaPredicted RBP10.53□□□□□ -0.72
LINC01961-201ENST00000449954 HRO43593 1189 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
LINC01961-201ENST00000449954 SH3TC2Q8TF17 1288 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 SLC10A4Q96EP9 437 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 WNK4Q96J92 1243 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 EPAS1Q99814 870 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 ANGEL1Q9UNK9 670 aaKnown RBP10.52□□□□□ -0.73
LINC01961-201ENST00000449954 TTC28Q96AY4 2481 aa10.52□□□□□ -0.73
LINC01961-201ENST00000449954 GNRH1P01148 92 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 BMP8BP34820 402 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 PLA2G5P39877 138 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 GJA8P48165 433 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 PRMT2P55345 433 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 CAP1Q01518 475 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 PDIA6Q15084 440 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 MAP3K11Q16584 847 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 LRIT3Q3SXY7 679 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 Q7L0L9 218 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 APOBEC3FQ8IUX4 373 aaKnown RBP10.51□□□□□ -0.73
LINC01961-201ENST00000449954 GMLQ99445 158 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 ZC3H12CQ9C0D7 883 aaKnown RBP10.51□□□□□ -0.73
LINC01961-201ENST00000449954 PANK3Q9H999 370 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 PRUNE2Q8WUY3 3088 aa10.51□□□□□ -0.73
LINC01961-201ENST00000449954 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
LINC01961-201ENST00000449954 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
LINC01961-201ENST00000449954 ZBED2Q9BTP6 218 aa10.5□□□□□ -0.73
LINC01961-201ENST00000449954 SCAF8Q9UPN6 1271 aaKnown RBP10.5□□□□□ -0.73
LINC01961-201ENST00000449954 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
LINC01961-201ENST00000449954 TESPA1A2RU30 521 aaPredicted RBP10.49□□□□□ -0.73
LINC01961-201ENST00000449954 GJB1P08034 283 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 MMP14P50281 582 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 PRKG1Q13976 671 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 NBPF9Q3BBW0 867 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 OGFOD1Q8N543 542 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
LINC01961-201ENST00000449954 SLC4A5Q9BY07 1137 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 STAP2Q9UGK3 403 aa10.49□□□□□ -0.73
LINC01961-201ENST00000449954 WNT10BO00744 389 aa10.48□□□□□ -0.73
LINC01961-201ENST00000449954 PPP1R12BO60237 982 aaPredicted RBP10.48□□□□□ -0.73
LINC01961-201ENST00000449954 FARP2O94887 1054 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms