RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 IRX2Q9BZI1 471 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-204ENST00000449510 TTC19Q6DKK2 380 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-204ENST00000449510 LRRN4CLQ8ND94 238 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 CCDC148Q8NFR7 591 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 NCOA7Q8NI08 942 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 BCCIPQ9P287 314 aaKnown RBP eCLIP14.19□□□□□ -0.14
UBE3B-204ENST00000449510 TTC31Q49AM3 519 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-204ENST00000449510 PLA2G4DQ86XP0 818 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 HELBQ8NG08 1087 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-204ENST00000449510 NAPBQ9H115 298 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 FAM135BQ49AJ0 1406 aa14.19□□□□□ -0.14
UBE3B-204ENST00000449510 CTAGE9A4FU28 777 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 XBP1P17861 261 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 TOB2Q14106 344 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-204ENST00000449510 UBAC1Q9BSL1 405 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-204ENST00000449510 PPP2R2CQ9Y2T4 447 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBE3B-204ENST00000449510 TNNI3KQ59H18 835 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 GRAMD1CQ8IYS0 662 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBE3B-204ENST00000449510 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 FPGT-TNNI3KV9GXZ4 949 aa14.18□□□□□ -0.14
UBE3B-204ENST00000449510 HOXC9P31274 260 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 PLCD4Q9BRC7 762 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 TTC37Q6PGP7 1564 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 TMEM232C9JQI7 657 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 E7EWF7 191 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 SASH1O94885 1247 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 EIF4A1P60842 406 aaKnown RBP14.17□□□□□ -0.14
UBE3B-204ENST00000449510 RAD51AP2Q09MP3 1159 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 PARD6BQ9BYG5 372 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 GBP3Q9H0R5 595 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 KIAA0232Q92628 1395 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 B4E1Z4 1266 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 ZBTB43O43298 467 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 CTIFO43310 598 aaKnown RBP14.17□□□□□ -0.14
UBE3B-204ENST00000449510 ALDH1L1O75891 902 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 TATP17735 454 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-204ENST00000449510 NLRP12P59046 1061 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 MRPS25P82663 173 aaKnown RBP14.17□□□□□ -0.14
UBE3B-204ENST00000449510 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
UBE3B-204ENST00000449510 RESTQ13127 1097 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 MYSM1Q5VVJ2 828 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 NBPF6Q5VWK0 638 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 NBPF4Q96M43 638 aa14.17□□□□□ -0.14
UBE3B-204ENST00000449510 KAT6BQ8WYB5 2073 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 SLC9C2Q5TAH2 1124 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 SLF1Q9BQI6 1058 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 RNASE9P60153 205 aaKnown RBP14.16□□□□□ -0.14
UBE3B-204ENST00000449510 RRAGBQ5VZM2 374 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 ADALQ6DHV7 355 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 RGS22Q8NE09 1264 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 DBNLQ9UJU6 430 aaKnown RBP14.16□□□□□ -0.14
UBE3B-204ENST00000449510 AOX1Q06278 1338 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 SHTN1A0MZ66 631 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 RANBP6O60518 1105 aaKnown RBP14.16□□□□□ -0.14
UBE3B-204ENST00000449510 SSBP05455 408 aaKnown RBP eCLIP14.16□□□□□ -0.14
UBE3B-204ENST00000449510 RBM6P78332 1123 aaKnown RBP14.16□□□□□ -0.14
UBE3B-204ENST00000449510 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 NSUN7Q8NE18 718 aaKnown RBP14.16□□□□□ -0.14
UBE3B-204ENST00000449510 ZHX3Q9H4I2 956 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 BRMS1Q9HCU9 246 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
UBE3B-204ENST00000449510 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 KIF24Q5T7B8 1368 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 E4F1Q66K89 784 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-204ENST00000449510 HDXQ7Z353 690 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 ELP1O95163 1332 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 GOLGA6L9A6NEM1 432 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 ARHGAP6O43182 974 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-204ENST00000449510 LONRF2Q1L5Z9 754 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 LRP2BPQ9P2M1 347 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 FAN1Q9Y2M0 1017 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 MAP3K5Q99683 1374 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 ATP10DQ9P241 1426 aa14.15□□□□□ -0.14
UBE3B-204ENST00000449510 MACROD2A1Z1Q3 448 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 ENC1O14682 589 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 CDR1P51861 262 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 LDHAL6AQ6ZMR3 332 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 IMPACTQ9P2X3 320 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 FLT4P35916 1363 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 AKR1B15C9JRZ8 316 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-204ENST00000449510 ARMCX5Q6P1M9 558 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 SMYD4Q8IYR2 804 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-204ENST00000449510 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
UBE3B-204ENST00000449510 PDIA3P30101 505 aaKnown RBP14.14□□□□□ -0.15
UBE3B-204ENST00000449510 LIG3P49916 1009 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 FUCA2Q9BTY2 467 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 TMEM51Q9NW97 253 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 ADAM21Q9UKJ8 722 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 RCOR1Q9UKL0 485 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms