RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 IGSF3O75054 1194 aa23.34■■□□□ 1.33
RPS28-202ENST00000449223 WASHC4Q2M389 1173 aa23.34■■□□□ 1.33
RPS28-202ENST00000449223 NLGN2Q8NFZ4 835 aa23.34■■□□□ 1.33
RPS28-202ENST00000449223 ZC3H12CQ9C0D7 883 aaKnown RBP23.34■■□□□ 1.33
RPS28-202ENST00000449223 VPS33BQ9H267 617 aa23.34■■□□□ 1.33
RPS28-202ENST00000449223 CD209Q9NNX6 404 aa23.34■■□□□ 1.33
RPS28-202ENST00000449223 CHD4Q14839 1912 aa23.33■■□□□ 1.33
RPS28-202ENST00000449223 LRRFIP1Q32MZ4 808 aaKnown RBP23.33■■□□□ 1.32
RPS28-202ENST00000449223 KLHL34Q8N239 644 aa23.33■■□□□ 1.32
RPS28-202ENST00000449223 FHDC1Q9C0D6 1143 aaPredicted RBP23.33■■□□□ 1.32
RPS28-202ENST00000449223 SALL1Q9NSC2 1324 aa23.32■■□□□ 1.32
RPS28-202ENST00000449223 KIAA2012Q0VF49 1180 aa23.32■■□□□ 1.32
RPS28-202ENST00000449223 ZNF219Q9P2Y4 722 aaPredicted RBP23.32■■□□□ 1.32
RPS28-202ENST00000449223 ZFYP08048 801 aaPredicted RBP23.31■■□□□ 1.32
RPS28-202ENST00000449223 ESYT1Q9BSJ8 1104 aa23.31■■□□□ 1.32
RPS28-202ENST00000449223 PIH1D3Q9NQM4 214 aaKnown RBP23.31■■□□□ 1.32
RPS28-202ENST00000449223 DIAPH3Q9NSV4 1193 aa23.31■■□□□ 1.32
RPS28-202ENST00000449223 IQSEC3Q9UPP2 1182 aaPredicted RBP23.31■■□□□ 1.32
RPS28-202ENST00000449223 MAST2Q6P0Q8 1798 aa23.31■■□□□ 1.32
RPS28-202ENST00000449223 RAD50Q92878 1312 aa23.31■■□□□ 1.32
RPS28-202ENST00000449223 TMED8Q6PL24 325 aaPredicted RBP23.3■■□□□ 1.32
RPS28-202ENST00000449223 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■□□□□ 10.3
RPS28-202ENST00000449223 ZNF646O15015 1829 aaPredicted RBP23.3■■□□□ 1.32
RPS28-202ENST00000449223 FAM205AQ6ZU69 1335 aa23.3■■□□□ 1.32
RPS28-202ENST00000449223 SEC24BO95487 1268 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 WDR66Q8TBY9 1149 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 RUFY2Q8WXA3 655 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 LTBP3Q9NS15 1303 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 PSME4Q14997 1843 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 CCDC88AQ3V6T2 1871 aa23.29■■□□□ 1.32
RPS28-202ENST00000449223 SGSM2O43147 1006 aa23.28■■□□□ 1.32
RPS28-202ENST00000449223 FRAT2O75474 233 aaPredicted RBP23.28■■□□□ 1.32
RPS28-202ENST00000449223 ZSCAN25Q6NSZ9 544 aa23.28■■□□□ 1.32
RPS28-202ENST00000449223 SYT17Q9BSW7 474 aa23.28■■□□□ 1.32
RPS28-202ENST00000449223 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
RPS28-202ENST00000449223 RNF113AO15541 343 aaKnown RBP23.28■■□□□ 1.32
RPS28-202ENST00000449223 EPB41L2O43491 1005 aaKnown RBP23.28■■□□□ 1.32
RPS28-202ENST00000449223 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
RPS28-202ENST00000449223 ADD2P35612 726 aa23.27■■□□□ 1.32
RPS28-202ENST00000449223 MAP3K12Q12852 859 aa23.27■■□□□ 1.32
RPS28-202ENST00000449223 NMIQ13287 307 aaPredicted RBP23.27■■□□□ 1.32
RPS28-202ENST00000449223 UBE3CQ15386 1083 aa23.27■■□□□ 1.32
RPS28-202ENST00000449223 ZMYM1Q5SVZ6 1142 aa23.27■■□□□ 1.32
RPS28-202ENST00000449223 CWC27Q6UX04 472 aaKnown RBP23.27■■□□□ 1.32
RPS28-202ENST00000449223 BCS1LQ9Y276 419 aa23.27■■□□□ 1.32
RPS28-202ENST00000449223 A0A0D9SFI3 127 aa23.26■■□□□ 1.31
RPS28-202ENST00000449223 TBC1D22AQ8WUA7 517 aa23.26■■□□□ 1.31
RPS28-202ENST00000449223 FAM227BQ96M60 508 aa23.26■■□□□ 1.31
RPS28-202ENST00000449223 IL25Q9H293 177 aa23.26■■□□□ 1.31
RPS28-202ENST00000449223 HELLSQ9NRZ9 838 aa23.26■■□□□ 1.31
RPS28-202ENST00000449223 SCN9AQ15858 1988 aa23.26■■□□□ 1.31
RPS28-202ENST00000449223 IDH1O75874 414 aaKnown RBP23.25■■□□□ 1.31
RPS28-202ENST00000449223 REC8O95072 547 aa23.25■■□□□ 1.31
RPS28-202ENST00000449223 TCRBV5S4A2TA0A5A2 114 aa23.24■■□□□ 1.31
RPS28-202ENST00000449223 NFKBIEO00221 500 aa23.24■■□□□ 1.31
RPS28-202ENST00000449223 AOC3Q16853 763 aa23.24■■□□□ 1.31
RPS28-202ENST00000449223 SLC9C2Q5TAH2 1124 aa23.24■■□□□ 1.31
RPS28-202ENST00000449223 APPBP2Q92624 585 aa23.24■■□□□ 1.31
RPS28-202ENST00000449223 TAOK3Q9H2K8 898 aa23.24■■□□□ 1.31
RPS28-202ENST00000449223 PPIP5K2O43314 1243 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 PDE6AP16499 860 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
RPS28-202ENST00000449223 LRP2BPQ9P2M1 347 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 SRCAPQ6ZRS2 3230 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 COL4A5P29400 1685 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 ECE2O60344 883 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 CHGBP05060 677 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 CHAF1AQ13111 956 aaPredicted RBP23.23■■□□□ 1.31
RPS28-202ENST00000449223 MCMDC2Q4G0Z9 681 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 ABCF2Q9UG63 623 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 SUGT1Q9Y2Z0 365 aa23.23■■□□□ 1.31
RPS28-202ENST00000449223 MFAP1P55081 439 aaKnown RBP23.22■■□□□ 1.31
RPS28-202ENST00000449223 FKBP1AP62942 108 aaKnown RBP23.22■■□□□ 1.31
RPS28-202ENST00000449223 DOK7Q18PE1 504 aa23.22■■□□□ 1.31
RPS28-202ENST00000449223 DBNDD1Q9H9R9 158 aa23.22■■□□□ 1.31
RPS28-202ENST00000449223 UPF2Q9HAU5 1272 aaKnown RBP23.22■■□□□ 1.31
RPS28-202ENST00000449223 TSHZ2Q9NRE2 1034 aa23.22■■□□□ 1.31
RPS28-202ENST00000449223 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
RPS28-202ENST00000449223 ERICH6Q7L0X2 663 aa23.21■■□□□ 1.31
RPS28-202ENST00000449223 ZNF277Q9NRM2 450 aaPredicted RBP23.21■■□□□ 1.31
RPS28-202ENST00000449223 ZNF532Q9HCE3 1301 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 G3V3G9 751 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 PRDX5P30044 214 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 DCAF8Q5TAQ9 597 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 STRIP1Q5VSL9 837 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 ZNF384Q8TF68 577 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 OSBP2Q969R2 916 aa23.2■■□□□ 1.3
RPS28-202ENST00000449223 NSUN4Q96CB9 384 aaKnown RBP23.2■■□□□ 1.3
RPS28-202ENST00000449223 MAST3O60307 1309 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 GTF2IP78347 998 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 MFSD14BQ5SR56 506 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 TTLL5Q6EMB2 1281 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 ZNF589Q86UQ0 364 aaPredicted RBP23.19■■□□□ 1.3
RPS28-202ENST00000449223 MAGEB6Q8N7X4 407 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 USP26Q9BXU7 913 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 RAI14Q9P0K7 980 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 CCDC171Q6TFL3 1326 aa23.19■■□□□ 1.3
RPS28-202ENST00000449223 LDHBP07195 334 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms