RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 CHMP4CQ96CF2 233 aa19.19■□□□□ 0.66
OTUB1-204ENST00000447683 ZSCAN16Q9H4T2 348 aaPredicted RBP19.19■□□□□ 0.66
OTUB1-204ENST00000447683 SALL1Q9NSC2 1324 aa19.19■□□□□ 0.66
OTUB1-204ENST00000447683 CAMTA2O94983 1202 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 UQCRFS1P1P0C7P4 283 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 PDIA3P30101 505 aaKnown RBP19.18■□□□□ 0.66
OTUB1-204ENST00000447683 CCDC102BQ68D86 513 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 DDX11Q96FC9 970 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
OTUB1-204ENST00000447683 NAA16Q6N069 864 aaPredicted RBP19.18■□□□□ 0.66
OTUB1-204ENST00000447683 BARGINQ6ZT62 677 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 LPIN2Q92539 896 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
OTUB1-204ENST00000447683 PHKA1P46020 1223 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 ITPK1Q13572 414 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 UBE3CQ15386 1083 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 PARP10Q53GL7 1025 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 LEO1Q8WVC0 666 aaPredicted RBP19.17■□□□□ 0.66
OTUB1-204ENST00000447683 SPATA32Q96LK8 384 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 UTP14AQ9BVJ6 771 aaKnown RBP19.17■□□□□ 0.66
OTUB1-204ENST00000447683 DOCK2Q92608 1830 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 PTPDC1A2A3K4 754 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 H3BQV1 296 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 IFFO2Q5TF58 517 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 MB21D2Q8IYB1 491 aaPredicted RBP19.17■□□□□ 0.66
OTUB1-204ENST00000447683 PIH1D3Q9NQM4 214 aaKnown RBP19.17■□□□□ 0.66
OTUB1-204ENST00000447683 TFIP11Q9UBB9 837 aaKnown RBP19.17■□□□□ 0.66
OTUB1-204ENST00000447683 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
OTUB1-204ENST00000447683 CHST3Q7LGC8 479 aa19.16■□□□□ 0.66
OTUB1-204ENST00000447683 COL5A3P25940 1745 aaPredicted RBP19.16■□□□□ 0.66
OTUB1-204ENST00000447683 ZNF831Q5JPB2 1677 aa19.16■□□□□ 0.66
OTUB1-204ENST00000447683 RTL9Q8NET4 1388 aa19.16■□□□□ 0.66
OTUB1-204ENST00000447683 WDR19Q8NEZ3 1342 aa19.16■□□□□ 0.66
OTUB1-204ENST00000447683 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
OTUB1-204ENST00000447683 HAND2P61296 217 aa19.16■□□□□ 0.66
OTUB1-204ENST00000447683 SLC9C2Q5TAH2 1124 aa19.16■□□□□ 0.66
OTUB1-204ENST00000447683 CCT2P78371 535 aaKnown RBP19.15■□□□□ 0.66
OTUB1-204ENST00000447683 GIMAP6Q6P9H5 292 aa19.15■□□□□ 0.66
OTUB1-204ENST00000447683 BCORQ6W2J9 1755 aa19.15■□□□□ 0.66
OTUB1-204ENST00000447683 MCM5P33992 734 aa19.14■□□□□ 0.66
OTUB1-204ENST00000447683 NCOA7Q8NI08 942 aa19.14■□□□□ 0.66
OTUB1-204ENST00000447683 MAP7D2Q96T17 732 aa19.14■□□□□ 0.66
OTUB1-204ENST00000447683 NOL7Q9UMY1 257 aaKnown RBP19.14■□□□□ 0.66
OTUB1-204ENST00000447683 ZNF213O14771 459 aa19.14■□□□□ 0.65
OTUB1-204ENST00000447683 LIG1P18858 919 aa19.14■□□□□ 0.65
OTUB1-204ENST00000447683 NCOA5Q9HCD5 579 aaKnown RBP19.14■□□□□ 0.65
OTUB1-204ENST00000447683 TCRBV5S4A2TA0A5A2 114 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 SLC5A1P13866 664 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 HELBQ8NG08 1087 aaPredicted RBP19.13■□□□□ 0.65
OTUB1-204ENST00000447683 PRC1O43663 620 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 NTSR2O95665 410 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 PDE6AP16499 860 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 ADD1P35611 737 aaKnown RBP19.13■□□□□ 0.65
OTUB1-204ENST00000447683 ANTXR2P58335 489 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 SMARCC1Q92922 1105 aaPredicted RBP19.13■□□□□ 0.65
OTUB1-204ENST00000447683 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
OTUB1-204ENST00000447683 ZNF532Q9HCE3 1301 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 A0A0G2JS52 829 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 IDH1O75874 414 aaKnown RBP19.12■□□□□ 0.65
OTUB1-204ENST00000447683 PGBD1Q96JS3 809 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 GPHNQ9NQX3 736 aaPredicted RBP19.12■□□□□ 0.65
OTUB1-204ENST00000447683 CCDC152Q4G0S7 254 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 NBPF3Q9H094 633 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 NUP62CLQ9H1M0 184 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 SEC31BQ9NQW1 1179 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 CCDC39Q9UFE4 941 aa19.12■□□□□ 0.65
OTUB1-204ENST00000447683 GOLGA6L4A6NEF3 574 aa19.11■□□□□ 0.65
OTUB1-204ENST00000447683 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 WWC3Q9ULE0 1092 aa19.11■□□□□ 0.65
OTUB1-204ENST00000447683 CARMIL3Q8ND23 1372 aa19.11■□□□□ 0.65
OTUB1-204ENST00000447683 FDPSP14324 419 aaKnown RBP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 MSNP26038 577 aaKnown RBP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 ATL3Q6DD88 541 aa19.11■□□□□ 0.65
OTUB1-204ENST00000447683 RALYLQ86SE5 291 aaKnown RBP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 SPATA5Q8NB90 893 aa19.11■□□□□ 0.65
OTUB1-204ENST00000447683 DDX19AQ9NUU7 478 aaKnown RBP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 NAP1L2Q9ULW6 460 aaPredicted RBP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 NIP7Q9Y221 180 aaKnown RBP eCLIP19.11■□□□□ 0.65
OTUB1-204ENST00000447683 NUTM2BA6NNL0 878 aaPredicted RBP19.1■□□□□ 0.65
OTUB1-204ENST00000447683 FAM177BA6PVY3 158 aa19.1■□□□□ 0.65
OTUB1-204ENST00000447683 NUTM2EB1AL46 878 aaPredicted RBP19.1■□□□□ 0.65
OTUB1-204ENST00000447683 NUTM2AQ8IVF1 878 aaPredicted RBP19.1■□□□□ 0.65
OTUB1-204ENST00000447683 HPS5Q9UPZ3 1129 aa19.1■□□□□ 0.65
OTUB1-204ENST00000447683 CCDC192P0DO97 292 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 ALX1Q15699 326 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 MAP3K11Q16584 847 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 RBM43Q6ZSC3 357 aaKnown RBP19.09■□□□□ 0.65
OTUB1-204ENST00000447683 DACT1Q9NYF0 836 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 ZMYM6O95789 1325 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 C4AP0C0L4 1744 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 C4BP0C0L5 1744 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 CHD4Q14839 1912 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 RASGRF1Q13972 1273 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 STRBPQ96SI9 672 aaKnown RBP19.09■□□□□ 0.65
OTUB1-204ENST00000447683 RCOR1Q9UKL0 485 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 ZKSCAN5Q9Y2L8 839 aa19.09■□□□□ 0.65
OTUB1-204ENST00000447683 KLF18A0A0U1RQI7 1052 aa19.08■□□□□ 0.65
OTUB1-204ENST00000447683 DHX16O60231 1041 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms