RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
CCDC18-205ENST00000447456 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
CCDC18-205ENST00000447456 WDR66Q8TBY9 1149 aa11.23□□□□□ -0.61
CCDC18-205ENST00000447456 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
CCDC18-205ENST00000447456 HAUS7Q99871 368 aa11.23□□□□□ -0.61
CCDC18-205ENST00000447456 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
CCDC18-205ENST00000447456 SALL3Q9BXA9 1300 aa11.23□□□□□ -0.61
CCDC18-205ENST00000447456 RASSF7Q02833 373 aa11.22□□□□□ -0.61
CCDC18-205ENST00000447456 RASGRF1Q13972 1273 aa11.22□□□□□ -0.61
CCDC18-205ENST00000447456 SPTY2D1Q68D10 685 aaPredicted RBP11.22□□□□□ -0.61
CCDC18-205ENST00000447456 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
CCDC18-205ENST00000447456 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
CCDC18-205ENST00000447456 FAM205AQ6ZU69 1335 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 IGSF3O75054 1194 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 MCAMP43121 646 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 EIF6P56537 245 aaKnown RBP11.21□□□□□ -0.61
CCDC18-205ENST00000447456 CHAF1AQ13111 956 aaPredicted RBP11.21□□□□□ -0.61
CCDC18-205ENST00000447456 TNIP1Q15025 636 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 TTC22Q5TAA0 569 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 TICAM2Q86XR7 235 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 PI4K2BQ8TCG2 481 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 FBXW7Q969H0 707 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 DNAJC2Q99543 621 aaKnown RBP11.21□□□□□ -0.61
CCDC18-205ENST00000447456 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 HMG20BQ9P0W2 317 aa11.21□□□□□ -0.61
CCDC18-205ENST00000447456 IQSEC3Q9UPP2 1182 aaPredicted RBP11.21□□□□□ -0.61
CCDC18-205ENST00000447456 CHD4Q14839 1912 aa11.21□□□□□ -0.62
CCDC18-205ENST00000447456 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
CCDC18-205ENST00000447456 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
CCDC18-205ENST00000447456 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 STRIP1Q5VSL9 837 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
CCDC18-205ENST00000447456 CNTROBQ8N137 903 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 EVI5LQ96CN4 794 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC18-205ENST00000447456 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 SUGT1Q9Y2Z0 365 aa11.2□□□□□ -0.62
CCDC18-205ENST00000447456 MYH13Q9UKX3 1938 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 GOLIM4O00461 696 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 ZAP70P43403 619 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 GTF2IP78347 998 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 MAP3K12Q12852 859 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 SCARF1Q14162 830 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 C9orf131Q5VYM1 1079 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 ZSCAN25Q6NSZ9 544 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 LRP2BPQ9P2M1 347 aa11.19□□□□□ -0.62
CCDC18-205ENST00000447456 FZD9O00144 591 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 HIP1O00291 1037 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 RAD17O75943 681 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 CYP2E1P05181 493 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-205ENST00000447456 LDHBP07195 334 aaKnown RBP11.18□□□□□ -0.62
CCDC18-205ENST00000447456 MMP14P50281 582 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 CIAPIN1Q6FI81 312 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 RILPL2Q969X0 211 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
CCDC18-205ENST00000447456 DICER1Q9UPY3 1922 aaKnown RBP11.17□□□□□ -0.62
CCDC18-205ENST00000447456 MAST3O60307 1309 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 ZFYP08048 801 aaPredicted RBP11.17□□□□□ -0.62
CCDC18-205ENST00000447456 VIL1P09327 827 aaKnown RBP11.17□□□□□ -0.62
CCDC18-205ENST00000447456 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
CCDC18-205ENST00000447456 GSTO1P78417 241 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 CXCL9Q07325 125 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 DACT2Q5SW24 774 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 PI16Q6UXB8 463 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 DZIP1Q86YF9 867 aaKnown RBP11.17□□□□□ -0.62
CCDC18-205ENST00000447456 KBTBD3Q8NAB2 608 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 RAI14Q9P0K7 980 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 SBF1O95248 1867 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 CCDC88AQ3V6T2 1871 aa11.17□□□□□ -0.62
CCDC18-205ENST00000447456 UTRNP46939 3433 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 YDJCA8MPS7 323 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 PSMD14O00487 310 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
CCDC18-205ENST00000447456 MAP4K4O95819 1239 aaPredicted RBP11.16□□□□□ -0.62
CCDC18-205ENST00000447456 GSPT1P15170 499 aaKnown RBP11.16□□□□□ -0.62
CCDC18-205ENST00000447456 SDSP20132 328 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 RSBN1LQ6PCB5 846 aaPredicted RBP11.16□□□□□ -0.62
CCDC18-205ENST00000447456 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 AGBL3Q8NEM8 1001 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 HDAC9Q9UKV0 1011 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
CCDC18-205ENST00000447456 COL1A1P02452 1464 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms