RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PTPN18Q99952 460 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-203ENST00000447360 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
LRRC28-203ENST00000447360 MINPP1Q9UNW1 487 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 FZD1Q9UP38 647 aa9.2□□□□□ -0.94
LRRC28-203ENST00000447360 DLG5Q8TDM6 1919 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-203ENST00000447360 TMPOP42166 694 aaKnown RBP9.19□□□□□ -0.94
LRRC28-203ENST00000447360 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
LRRC28-203ENST00000447360 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
LRRC28-203ENST00000447360 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 DLGAP5Q15398 846 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 KIAA0825Q8IV33 1275 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 ANKRD13AQ8IZ07 590 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 LEMD3Q9Y2U8 911 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 PTCH2Q9Y6C5 1203 aa9.19□□□□□ -0.94
LRRC28-203ENST00000447360 ZNF804BA4D1E1 1349 aa9.18□□□□□ -0.94
LRRC28-203ENST00000447360 MYO1BO43795 1136 aa9.18□□□□□ -0.94
LRRC28-203ENST00000447360 GJA5P36382 358 aa9.18□□□□□ -0.94
LRRC28-203ENST00000447360 PSME4Q14997 1843 aa9.18□□□□□ -0.94
LRRC28-203ENST00000447360 CCDC85AQ96PX6 553 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-203ENST00000447360 PRO3102Q9H379 93 aa9.18□□□□□ -0.94
LRRC28-203ENST00000447360 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
LRRC28-203ENST00000447360 CWC25Q9NXE8 425 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-203ENST00000447360 USP2O75604 605 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-203ENST00000447360 GNRH1P01148 92 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 CTSWP56202 376 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 GTF2IP78347 998 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 TXNRD3Q86VQ6 643 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 DPF3Q92784 378 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 MYD88Q99836 296 aa9.17□□□□□ -0.94
LRRC28-203ENST00000447360 UNC80Q8N2C7 3258 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 A0A1W2PPC1 479 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 WDHD1O75717 1129 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-203ENST00000447360 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-203ENST00000447360 PRMT2P55345 433 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-203ENST00000447360 NBPF12Q5TAG4 269 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-203ENST00000447360 DUSP27Q5VZP5 1158 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 NKX2-3Q8TAU0 364 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 SH3TC2Q8TF17 1288 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 OPTNQ96CV9 577 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 ANKRD2Q9GZV1 360 aa9.16□□□□□ -0.94
LRRC28-203ENST00000447360 LAS1LQ9Y4W2 734 aaKnown RBP9.16□□□□□ -0.94
LRRC28-203ENST00000447360 SPDYE2BA6NHP3 402 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 SPDYE6P0CI01 402 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 GTF2A2P52657 109 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 RASA3Q14644 834 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 KIF22Q14807 665 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 BRI3BPQ8WY22 251 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 HTATIP2Q9BUP3 242 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 METTL22Q9BUU2 404 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-203ENST00000447360 GREM2Q9H772 168 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 NR2E3Q9Y5X4 410 aa9.15□□□□□ -0.94
LRRC28-203ENST00000447360 VCANP13611 3396 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 CCL15-CCL14A0A0B4J2E2 113 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 CLRN2A0PK11 232 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 TLR2O60603 784 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 DDX58O95786 925 aaKnown RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 MYCP01106 439 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 IGHMBP2P38935 993 aaKnown RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 FKBP1AP62942 108 aaKnown RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 LACTBP83111 547 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 TNFAIP1Q13829 316 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 CCL15Q16663 113 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 CFAP100Q494V2 611 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 UBE2Q1Q7Z7E8 422 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 CERS5Q8N5B7 392 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 JARID2Q92833 1246 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 SHISA4Q96DD7 197 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 PRMT6Q96LA8 375 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 PHAXQ9H814 394 aaKnown RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 ELP3Q9H9T3 547 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 VEZTQ9HBM0 779 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 CD209Q9NNX6 404 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 ZCCHC17Q9NP64 241 aaKnown RBP9.14□□□□□ -0.95
LRRC28-203ENST00000447360 TRIM35Q9UPQ4 493 aa9.14□□□□□ -0.95
LRRC28-203ENST00000447360 KLRK1P26718 216 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 GJA8P48165 433 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 NEUROD2Q15784 382 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-203ENST00000447360 C15orf52Q6ZUT6 534 aaKnown RBP9.13□□□□□ -0.95
LRRC28-203ENST00000447360 FAM43AQ8N2R8 423 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 HELBQ8NG08 1087 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-203ENST00000447360 CHMP4AQ9BY43 222 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 LAMB1P07942 1786 aa9.13□□□□□ -0.95
LRRC28-203ENST00000447360 GJB1P08034 283 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 KCNJ4P48050 445 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 MTFR1Q15390 333 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 GPR153Q6NV75 609 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 ARHGAP39Q9C0H5 1083 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 PCDHAC2Q9Y5I4 1007 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 CSADQ9Y600 493 aa9.12□□□□□ -0.95
LRRC28-203ENST00000447360 F8W031 263 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms