RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 EPS15P42566 896 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 KDM2BQ8NHM5 1336 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 CYP7A1P22680 504 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 MAP3K12Q12852 859 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 MTX1Q13505 466 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 DENND2AQ9ULE3 1009 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 SCARF1Q14162 830 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 NAA16Q6N069 864 aaPredicted RBP12.47□□□□□ -0.41
LIN54-203ENST00000446851 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
LIN54-203ENST00000446851 IBTKQ9P2D0 1353 aaPredicted RBP12.46□□□□□ -0.41
LIN54-203ENST00000446851 PAPPAQ13219 1627 aa12.46□□□□□ -0.41
LIN54-203ENST00000446851 SHTN1A0MZ66 631 aa12.46□□□□□ -0.41
LIN54-203ENST00000446851 TCP10L2B9ZVM9 353 aa12.46□□□□□ -0.41
LIN54-203ENST00000446851 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.42
LIN54-203ENST00000446851 AAMPQ13685 434 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 C7orf43Q8WVR3 580 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 PSMD1Q99460 953 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
LIN54-203ENST00000446851 LAMB4A4D0S4 1761 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 USP5P45974 858 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 HDAC1Q13547 482 aaPredicted RBP12.45□□□□□ -0.42
LIN54-203ENST00000446851 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
LIN54-203ENST00000446851 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
LIN54-203ENST00000446851 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.45□□□□□ -0.42
LIN54-203ENST00000446851 HMG20BQ9P0W2 317 aa12.45□□□□□ -0.42
LIN54-203ENST00000446851 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
LIN54-203ENST00000446851 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
LIN54-203ENST00000446851 PAG1Q9NWQ8 432 aa12.44□□□□□ -0.42
LIN54-203ENST00000446851 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
LIN54-203ENST00000446851 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
LIN54-203ENST00000446851 MCAMP43121 646 aa12.44□□□□□ -0.42
LIN54-203ENST00000446851 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
LIN54-203ENST00000446851 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
LIN54-203ENST00000446851 YDJCA8MPS7 323 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
LIN54-203ENST00000446851 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
LIN54-203ENST00000446851 SPTY2D1Q68D10 685 aaPredicted RBP12.43□□□□□ -0.42
LIN54-203ENST00000446851 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
LIN54-203ENST00000446851 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 NOP58Q9Y2X3 529 aaKnown RBP12.43□□□□□ -0.42
LIN54-203ENST00000446851 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 PDE1AP54750 535 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 TEKT1Q969V4 418 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 TAF1P21675 1872 aa12.43□□□□□ -0.42
LIN54-203ENST00000446851 KIAA1211Q6ZU35 1233 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 DCPSQ96C86 337 aaKnown RBP12.42□□□□□ -0.42
LIN54-203ENST00000446851 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
LIN54-203ENST00000446851 RREB1Q92766 1687 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 MINDY4BA8MYZ0 360 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 CFAP100Q494V2 611 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 ZGPATQ8N5A5 531 aaKnown RBP12.42□□□□□ -0.42
LIN54-203ENST00000446851 TBC1D22AQ8WUA7 517 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
LIN54-203ENST00000446851 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
LIN54-203ENST00000446851 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 CHGBP05060 677 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 EPHX2P34913 555 aa12.42□□□□□ -0.42
LIN54-203ENST00000446851 RSBN1LQ6PCB5 846 aaPredicted RBP12.42□□□□□ -0.42
LIN54-203ENST00000446851 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 USP40Q9NVE5 1235 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 PRELPP51888 382 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 NUCB1Q02818 461 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 DLK2Q6UY11 383 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 LDHCP07864 332 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 LRRFIP1Q32MZ4 808 aaKnown RBP12.41□□□□□ -0.42
LIN54-203ENST00000446851 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 STRIP1Q5VSL9 837 aa12.41□□□□□ -0.42
LIN54-203ENST00000446851 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.42
LIN54-203ENST00000446851 GRIK5Q16478 980 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
LIN54-203ENST00000446851 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
LIN54-203ENST00000446851 BAG3O95817 575 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
LIN54-203ENST00000446851 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
LIN54-203ENST00000446851 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 GGA3Q9NZ52 723 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 N4BP2Q86UW6 1770 aaPredicted RBP12.4□□□□□ -0.42
LIN54-203ENST00000446851 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 TDO2P48775 406 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
LIN54-203ENST00000446851 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms