RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SCN7AQ01118 1682 aa16.2■□□□□ 0.18
RBM39-216ENST00000444878 SNAP23O00161 211 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 FGAP02671 866 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
RBM39-216ENST00000444878 RC3H1Q5TC82 1133 aaKnown RBP16.19■□□□□ 0.18
RBM39-216ENST00000444878 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
RBM39-216ENST00000444878 CNPY2Q9Y2B0 182 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 FOXP2O15409 715 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 GTF2E1P29083 439 aaPredicted RBP16.19■□□□□ 0.18
RBM39-216ENST00000444878 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
RBM39-216ENST00000444878 BICDL1Q6ZP65 573 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 SPATA5Q8NB90 893 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 TMEM63CQ9P1W3 806 aa16.19■□□□□ 0.18
RBM39-216ENST00000444878 DOCK2Q92608 1830 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 RGL2O15211 777 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 HAND2P61296 217 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 FAM182BQ5T319 152 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 ZNF532Q9HCE3 1301 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 CHRNDQ07001 517 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 AGXT2Q9BYV1 514 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
RBM39-216ENST00000444878 ATRNO75882 1429 aa16.18■□□□□ 0.18
RBM39-216ENST00000444878 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
RBM39-216ENST00000444878 GADD45BO75293 160 aaPredicted RBP16.17■□□□□ 0.18
RBM39-216ENST00000444878 PDE6AP16499 860 aa16.17■□□□□ 0.18
RBM39-216ENST00000444878 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
RBM39-216ENST00000444878 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
RBM39-216ENST00000444878 SMIM5Q71RC9 77 aa16.17■□□□□ 0.18
RBM39-216ENST00000444878 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
RBM39-216ENST00000444878 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
RBM39-216ENST00000444878 ZNF213O14771 459 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 GNPATO15228 680 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 FIBPO43427 364 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 PFKFB2O60825 505 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 APOBRQ0VD83 1088 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 SCRN1Q12765 414 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
RBM39-216ENST00000444878 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 CHST3Q7LGC8 479 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 ANKRD18AQ8IVF6 992 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
RBM39-216ENST00000444878 WWC3Q9ULE0 1092 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 JAK2O60674 1132 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 ZPR1O75312 459 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 DNM1Q05193 864 aaKnown RBP16.16■□□□□ 0.18
RBM39-216ENST00000444878 MAP3K12Q12852 859 aa16.16■□□□□ 0.18
RBM39-216ENST00000444878 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 BCAMP50895 628 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 LLPHQ9BRT6 129 aaKnown RBP16.15■□□□□ 0.18
RBM39-216ENST00000444878 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
RBM39-216ENST00000444878 RTCBQ9Y3I0 505 aaKnown RBP16.15■□□□□ 0.18
RBM39-216ENST00000444878 LY75O60449 1722 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 APPP05067 770 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 FAM184AQ8NB25 1140 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 AIDAQ96BJ3 306 aa16.15■□□□□ 0.18
RBM39-216ENST00000444878 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
RBM39-216ENST00000444878 COL4A1P02462 1669 aa16.14■□□□□ 0.18
RBM39-216ENST00000444878 TCRBV5S4A2TA0A5A2 114 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 SYCE3A1L190 88 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 BRD2P25440 801 aaKnown RBP16.14■□□□□ 0.17
RBM39-216ENST00000444878 UBE2HP62256 183 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 PDE4CQ08493 712 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 RALYLQ86SE5 291 aaKnown RBP16.14■□□□□ 0.17
RBM39-216ENST00000444878 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 NCOA7Q8NI08 942 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 CHD4Q14839 1912 aa16.14■□□□□ 0.17
RBM39-216ENST00000444878 MCM5P33992 734 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
RBM39-216ENST00000444878 AFF2P51816 1311 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 NASPP49321 788 aaPredicted RBP16.13■□□□□ 0.17
RBM39-216ENST00000444878 KRT85P78386 507 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
RBM39-216ENST00000444878 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 CHMP4CQ96CF2 233 aa16.13■□□□□ 0.17
RBM39-216ENST00000444878 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
RBM39-216ENST00000444878 COL24A1Q17RW2 1714 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 H3BQV1 296 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
RBM39-216ENST00000444878 TRDNQ13061 729 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
RBM39-216ENST00000444878 STRBPQ96SI9 672 aaKnown RBP16.12■□□□□ 0.17
RBM39-216ENST00000444878 PRC1O43663 620 aa16.12■□□□□ 0.17
RBM39-216ENST00000444878 PDIA3P30101 505 aaKnown RBP16.12■□□□□ 0.17
RBM39-216ENST00000444878 HMGN5P82970 282 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms