RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 CCDC144CPQ8IYA2 1237 aa25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 DDX17Q92841 729 aaKnown RBP25.34■■□□□ 1.65
SKIDA1-201ENST00000444772 YEATS4O95619 227 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 BRAPQ7Z569 592 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 CADPS2Q86UW7 1296 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 DHX40Q8IX18 779 aaKnown RBP25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 PDCL2Q8N4E4 241 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 ISCA1Q9BUE6 129 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 ZBTB3Q9H5J0 574 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 PCDHA7Q9UN72 937 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 PAPPAQ13219 1627 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 A1BGP04217 495 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 GORABQ5T7V8 394 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 C16orf45Q96MC5 204 aaPredicted RBP25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 POLR3EQ9NVU0 708 aa25.33■■□□□ 1.65
SKIDA1-201ENST00000444772 A0A0G2JLW4 131 aa25.32■■□□□ 1.64
SKIDA1-201ENST00000444772 FKBP4Q02790 459 aaKnown RBP eCLIP25.32■■□□□ 1.64
SKIDA1-201ENST00000444772 TPD52L1Q16890 204 aaPredicted RBP25.32■■□□□ 1.64
SKIDA1-201ENST00000444772 TRIM28Q13263 835 aaKnown RBP25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 TTLL5Q6EMB2 1281 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 LINC00301Q8NCQ3 95 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 C8orf76Q96K31 380 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 GUCY1B3Q02153 619 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 CHST3Q7LGC8 479 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 APPBP2Q92624 585 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 BPIFA3Q9BQP9 254 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 PUS3Q9BZE2 481 aaKnown RBP25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 WDR17Q8IZU2 1322 aa25.31■■□□□ 1.64
SKIDA1-201ENST00000444772 FBXO18Q8NFZ0 1043 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 SDF4Q9BRK5 362 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 WASHC4Q2M389 1173 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 MB21D2Q8IYB1 491 aaPredicted RBP25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 NCOA7Q8NI08 942 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 XAGE2Q96GT9 111 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 TNS2Q63HR2 1409 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 GSDMDP57764 484 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 TCIRG1Q13488 830 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 PLA2G12BQ9BX93 195 aa25.3■■□□□ 1.64
SKIDA1-201ENST00000444772 PRC1O43663 620 aa25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 DHX8Q14562 1220 aaKnown RBP25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 STK38Q15208 465 aa25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 SF3A1Q15459 793 aaKnown RBP25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 PPP4R3BQ5MIZ7 849 aa25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 KCND1Q9NSA2 647 aa25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 FGAP02671 866 aa25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 ZRSR1Q15695 479 aaKnown RBP25.29■■□□□ 1.64
SKIDA1-201ENST00000444772 FOXP2O15409 715 aa25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 CCDC112Q8NEF3 446 aa25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 IMPACTQ9P2X3 320 aa25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 NWD2Q9ULI1 1742 aa25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 FAM177BA6PVY3 158 aa25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 RALYLQ86SE5 291 aaKnown RBP25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 KIAA1468Q9P260 1216 aa25.28■■□□□ 1.64
SKIDA1-201ENST00000444772 KLF18A0A0U1RQI7 1052 aa25.27■■□□□ 1.64
SKIDA1-201ENST00000444772 ARID3AQ99856 593 aa25.27■■□□□ 1.64
SKIDA1-201ENST00000444772 ORC3Q9UBD5 711 aaPredicted RBP25.27■■□□□ 1.64
SKIDA1-201ENST00000444772 GOLGA8BA8MQT2 603 aa25.27■■□□□ 1.64
SKIDA1-201ENST00000444772 CPLX1O14810 134 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 SPTLC2O15270 562 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 PCCAP05165 728 aaPredicted RBP25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 SKILP12757 684 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 CEP135Q66GS9 1140 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 AOPEPQ8N6M6 819 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 PKNOX2Q96KN3 472 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 HPS5Q9UPZ3 1129 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 ZNF213O14771 459 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 MYSM1Q5VVJ2 828 aa25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.26■■□□□ 1.63
SKIDA1-201ENST00000444772 DDX60Q8IY21 1712 aaKnown RBP25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 NDUFA8P51970 172 aa25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 SYNE3Q6ZMZ3 975 aa25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 CSF1RP07333 972 aa25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 ADORA1P30542 326 aa25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 TOM1L2Q6ZVM7 507 aa25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 OSBPL5Q9H0X9 879 aaPredicted RBP25.25■■□□□ 1.63
SKIDA1-201ENST00000444772 A0A1B0GVL5 298 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 CCDC69A6NI79 296 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 TAF7LQ5H9L4 462 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 CLIC4Q9Y696 253 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 HAND2P61296 217 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 NCBP1Q09161 790 aaKnown RBP25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 IFIT5Q13325 482 aaKnown RBP25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 NYAP1Q6ZVC0 841 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 FEZ1Q99689 392 aa25.24■■□□□ 1.63
SKIDA1-201ENST00000444772 KIF2AO00139 706 aaPredicted RBP25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 TPM4P67936 248 aa25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 GPHNQ9NQX3 736 aaPredicted RBP25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 CCZ1BP86790 482 aa25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 CCZ1P86791 482 aaPredicted RBP25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 PTPN14Q15678 1187 aa25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 ZNF512BQ96KM6 892 aaPredicted RBP25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 TEX13AQ9BXU3 409 aaPredicted RBP25.23■■□□□ 1.63
SKIDA1-201ENST00000444772 ZAP70P43403 619 aa25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 ANTXR2P58335 489 aa25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 ZBTB38Q8NAP3 1195 aaPredicted RBP25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 GPAA1O43292 621 aa25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 PPFIA3O75145 1194 aa25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 IL2RBP14784 551 aa25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 CMA1P23946 247 aa25.22■■□□□ 1.63
SKIDA1-201ENST00000444772 TRDNQ13061 729 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms