RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZSCAN22P10073 491 aaPredicted RBP18.59■□□□□ 0.57
SNX13-204ENST00000444712 KRT27Q7Z3Y8 459 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 ZNF532Q9HCE3 1301 aa18.58■□□□□ 0.57
SNX13-204ENST00000444712 COL4A1P02462 1669 aa18.58■□□□□ 0.57
SNX13-204ENST00000444712 SYT1P21579 422 aa18.58■□□□□ 0.56
SNX13-204ENST00000444712 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.56
SNX13-204ENST00000444712 ANKRD2Q9GZV1 360 aa18.58■□□□□ 0.56
SNX13-204ENST00000444712 LMBRD1Q9NUN5 540 aa18.58■□□□□ 0.56
SNX13-204ENST00000444712 ZNF804BA4D1E1 1349 aa18.58■□□□□ 0.56
SNX13-204ENST00000444712 ZMYM6O95789 1325 aa18.58■□□□□ 0.56
SNX13-204ENST00000444712 CHD4Q14839 1912 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 NPHP1O15259 732 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 CAVIN4Q5BKX8 364 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 FBXL16Q8N461 479 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 RPS8P62241 208 aaKnown RBP18.57■□□□□ 0.56
SNX13-204ENST00000444712 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 TCEANC2Q96MN5 208 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 MINPP1Q9UNW1 487 aa18.57■□□□□ 0.56
SNX13-204ENST00000444712 TCRBV5S4A2TA0A5A2 114 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 ZNF213O14771 459 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 FGAP02671 866 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 EXOSC10Q01780 885 aaKnown RBP18.56■□□□□ 0.56
SNX13-204ENST00000444712 ST3GAL1Q11201 340 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 GTF3C6Q969F1 213 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 AIDAQ96BJ3 306 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 WDR19Q8NEZ3 1342 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
SNX13-204ENST00000444712 SEMA3EO15041 775 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 PHF14O94880 888 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 MBD3O95983 291 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 BCAMP50895 628 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 NECAB1Q8N987 351 aa18.56■□□□□ 0.56
SNX13-204ENST00000444712 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
SNX13-204ENST00000444712 FOXP2O15409 715 aa18.55■□□□□ 0.56
SNX13-204ENST00000444712 F13A1P00488 732 aa18.55■□□□□ 0.56
SNX13-204ENST00000444712 GNAT2P19087 354 aa18.55■□□□□ 0.56
SNX13-204ENST00000444712 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
SNX13-204ENST00000444712 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
SNX13-204ENST00000444712 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
SNX13-204ENST00000444712 LLPHQ9BRT6 129 aaKnown RBP18.55■□□□□ 0.56
SNX13-204ENST00000444712 WWC3Q9ULE0 1092 aa18.55■□□□□ 0.56
SNX13-204ENST00000444712 GOLGA6L3A6NEY3 463 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 ALX1Q15699 326 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 NCOA7Q8NI08 942 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
SNX13-204ENST00000444712 BRF1Q92994 677 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 DENND2AQ9ULE3 1009 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 TCHHQ07283 1943 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 ZBTB22O15209 634 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 PRPF40AO75400 957 aaKnown RBP18.54■□□□□ 0.56
SNX13-204ENST00000444712 CSPP1Q1MSJ5 1256 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 RALYLQ86SE5 291 aaKnown RBP18.54■□□□□ 0.56
SNX13-204ENST00000444712 VPS37DQ86XT2 251 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 MAGEB6Q8N7X4 407 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
SNX13-204ENST00000444712 PDS5AQ29RF7 1337 aaKnown RBP18.53■□□□□ 0.56
SNX13-204ENST00000444712 SNAP23O00161 211 aa18.53■□□□□ 0.56
SNX13-204ENST00000444712 PFKFB2O60825 505 aa18.53■□□□□ 0.56
SNX13-204ENST00000444712 NCLP19338 710 aaKnown RBP18.53■□□□□ 0.56
SNX13-204ENST00000444712 MCM5P33992 734 aa18.53■□□□□ 0.56
SNX13-204ENST00000444712 TRDNQ13061 729 aa18.53■□□□□ 0.56
SNX13-204ENST00000444712 COL9A3Q14050 684 aaPredicted RBP18.53■□□□□ 0.56
SNX13-204ENST00000444712 ZNF772Q68DY9 489 aaPredicted RBP18.53■□□□□ 0.56
SNX13-204ENST00000444712 TTLL5Q6EMB2 1281 aa18.53■□□□□ 0.56
SNX13-204ENST00000444712 ZNF274Q96GC6 653 aaPredicted RBP18.53■□□□□ 0.56
SNX13-204ENST00000444712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
SNX13-204ENST00000444712 NFIXQ14938 502 aa18.52■□□□□ 0.56
SNX13-204ENST00000444712 LARP1BQ659C4 914 aaKnown RBP18.52■□□□□ 0.56
SNX13-204ENST00000444712 AMIGO3Q86WK7 504 aa18.52■□□□□ 0.56
SNX13-204ENST00000444712 STRBPQ96SI9 672 aaKnown RBP18.52■□□□□ 0.56
SNX13-204ENST00000444712 LRP2BPQ9P2M1 347 aa18.52■□□□□ 0.56
SNX13-204ENST00000444712 PNPLA7Q6ZV29 1317 aa18.52■□□□□ 0.56
SNX13-204ENST00000444712 MAST2Q6P0Q8 1798 aa18.52■□□□□ 0.56
SNX13-204ENST00000444712 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.55
SNX13-204ENST00000444712 TMED8Q6PL24 325 aaPredicted RBP18.52■□□□□ 0.55
SNX13-204ENST00000444712 TIAM2Q8IVF5 1701 aa18.52■□□□□ 0.55
SNX13-204ENST00000444712 MTMR6Q9Y217 621 aa18.52■□□□□ 0.55
SNX13-204ENST00000444712 FSD2A1L4K1 749 aa18.51■□□□□ 0.55
SNX13-204ENST00000444712 PATL2C9JE40 543 aaKnown RBP18.51■□□□□ 0.55
SNX13-204ENST00000444712 APPP05067 770 aa18.51■□□□□ 0.55
SNX13-204ENST00000444712 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
SNX13-204ENST00000444712 HMGN5P82970 282 aaKnown RBP18.51■□□□□ 0.55
SNX13-204ENST00000444712 STK3Q13188 491 aa18.51■□□□□ 0.55
SNX13-204ENST00000444712 TMEM87AQ8NBN3 555 aa18.51■□□□□ 0.55
SNX13-204ENST00000444712 EVCP57679 992 aa18.5■□□□□ 0.55
SNX13-204ENST00000444712 NACAP1Q9BZK3 213 aa18.5■□□□□ 0.55
SNX13-204ENST00000444712 IGSF3O75054 1194 aa18.5■□□□□ 0.55
SNX13-204ENST00000444712 HAND2P61296 217 aa18.5■□□□□ 0.55
SNX13-204ENST00000444712 ST5P78524 1137 aa18.5■□□□□ 0.55
SNX13-204ENST00000444712 MB21D2Q8IYB1 491 aaPredicted RBP18.5■□□□□ 0.55
SNX13-204ENST00000444712 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
SNX13-204ENST00000444712 TRIM37O94972 964 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 MBD4O95243 580 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 GYG1P46976 350 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 GRAPQ13588 217 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 FBXO33Q7Z6M2 555 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 GRAPLQ8TC17 118 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms