RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 COL1A1P02452 1464 aaPredicted RBP27.18■■□□□ 1.94
TRAF4-205ENST00000444415 LPIN2Q92539 896 aa27.17■■□□□ 1.94
TRAF4-205ENST00000444415 KLRG1Q96E93 195 aa27.17■■□□□ 1.94
TRAF4-205ENST00000444415 YTHDC1Q96MU7 727 aaKnown RBP27.17■■□□□ 1.94
TRAF4-205ENST00000444415 GGA3Q9NZ52 723 aa27.17■■□□□ 1.94
TRAF4-205ENST00000444415 TMEM88BA6NKF7 163 aa27.16■■□□□ 1.94
TRAF4-205ENST00000444415 FKBP1AP62942 108 aaKnown RBP27.16■■□□□ 1.94
TRAF4-205ENST00000444415 SCARF1Q14162 830 aa27.16■■□□□ 1.94
TRAF4-205ENST00000444415 NBPF9Q3BBW0 867 aa27.16■■□□□ 1.94
TRAF4-205ENST00000444415 C20orf194Q5TEA3 1177 aa27.16■■□□□ 1.94
TRAF4-205ENST00000444415 ZBED3Q96IU2 234 aaPredicted RBP27.16■■□□□ 1.94
TRAF4-205ENST00000444415 CEP126Q9P2H0 1117 aa27.16■■□□□ 1.94
TRAF4-205ENST00000444415 ECM29Q5VYK3 1845 aa27.15■■□□□ 1.94
TRAF4-205ENST00000444415 IFIT1P09914 478 aaKnown RBP27.15■■□□□ 1.94
TRAF4-205ENST00000444415 ATP2B3Q16720 1220 aa27.15■■□□□ 1.94
TRAF4-205ENST00000444415 SSH3Q8TE77 659 aa27.15■■□□□ 1.94
TRAF4-205ENST00000444415 PCDHAC2Q9Y5I4 1007 aa27.15■■□□□ 1.94
TRAF4-205ENST00000444415 ADM5C9JUS6 153 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 WNT10BO00744 389 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 ATP8B2P98198 1209 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 MVPQ14764 893 aaKnown RBP27.14■■□□□ 1.94
TRAF4-205ENST00000444415 GRIK5Q16478 980 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 CDC37L1Q7L3B6 337 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 USP48Q86UV5 1035 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 COG6Q9Y2V7 657 aa27.14■■□□□ 1.94
TRAF4-205ENST00000444415 SLC5A1P13866 664 aa27.13■■□□□ 1.93
TRAF4-205ENST00000444415 ADORA1P30542 326 aa27.13■■□□□ 1.93
TRAF4-205ENST00000444415 TFCP2Q12800 502 aa27.13■■□□□ 1.93
TRAF4-205ENST00000444415 CAVIN4Q5BKX8 364 aa27.13■■□□□ 1.93
TRAF4-205ENST00000444415 ANGEL2Q5VTE6 544 aaKnown RBP27.13■■□□□ 1.93
TRAF4-205ENST00000444415 SCAF8Q9UPN6 1271 aaKnown RBP27.13■■□□□ 1.93
TRAF4-205ENST00000444415 F8W031 263 aaPredicted RBP27.12■■□□□ 1.93
TRAF4-205ENST00000444415 MFSD14BQ5SR56 506 aa27.12■■□□□ 1.93
TRAF4-205ENST00000444415 CEP85Q6P2H3 762 aa27.12■■□□□ 1.93
TRAF4-205ENST00000444415 KRT26Q7Z3Y9 468 aa27.12■■□□□ 1.93
TRAF4-205ENST00000444415 OGFOD1Q8N543 542 aa27.12■■□□□ 1.93
TRAF4-205ENST00000444415 AOX1Q06278 1338 aa27.12■■□□□ 1.93
TRAF4-205ENST00000444415 CNTNAP1P78357 1384 aa27.11■■□□□ 1.93
TRAF4-205ENST00000444415 VPS37DQ86XT2 251 aa27.11■■□□□ 1.93
TRAF4-205ENST00000444415 MS4A1P11836 297 aa27.1■■□□□ 1.93
TRAF4-205ENST00000444415 MKRN1Q9UHC7 482 aaKnown RBP27.1■■□□□ 1.93
TRAF4-205ENST00000444415 MMP14P50281 582 aa27.09■■□□□ 1.93
TRAF4-205ENST00000444415 TIMM10P62072 90 aa27.09■■□□□ 1.93
TRAF4-205ENST00000444415 CHAF1AQ13111 956 aaPredicted RBP27.09■■□□□ 1.93
TRAF4-205ENST00000444415 DCPSQ96C86 337 aaKnown RBP27.09■■□□□ 1.93
TRAF4-205ENST00000444415 PITPNM2Q9BZ72 1349 aa27.08■■□□□ 1.93
TRAF4-205ENST00000444415 CELF2O95319 508 aaKnown RBP27.08■■□□□ 1.93
TRAF4-205ENST00000444415 PHKA1P46020 1223 aa27.08■■□□□ 1.93
TRAF4-205ENST00000444415 JMYQ8N9B5 988 aa27.08■■□□□ 1.93
TRAF4-205ENST00000444415 MTMR14Q8NCE2 650 aa27.08■■□□□ 1.93
TRAF4-205ENST00000444415 ZBTB40Q9NUA8 1239 aa27.08■■□□□ 1.93
TRAF4-205ENST00000444415 A0A1B0GUL7 405 aa27.07■■□□□ 1.92
TRAF4-205ENST00000444415 HDAC9Q9UKV0 1011 aa27.07■■□□□ 1.92
TRAF4-205ENST00000444415 RASSF10A6NK89 507 aa27.06■■□□□ 1.92
TRAF4-205ENST00000444415 DDX19BQ9UMR2 479 aa27.06■■□□□ 1.92
TRAF4-205ENST00000444415 PDE3AQ14432 1141 aa27.06■■□□□ 1.92
TRAF4-205ENST00000444415 CFAP100Q494V2 611 aa27.06■■□□□ 1.92
TRAF4-205ENST00000444415 NOP58Q9Y2X3 529 aaKnown RBP27.06■■□□□ 1.92
TRAF4-205ENST00000444415 CCDC102BQ68D86 513 aa27.05■■□□□ 1.92
TRAF4-205ENST00000444415 SULF1Q8IWU6 871 aa27.05■■□□□ 1.92
TRAF4-205ENST00000444415 PRMT6Q96LA8 375 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-205ENST00000444415 ZNF408Q9H9D4 720 aa27.05■■□□□ 1.92
TRAF4-205ENST00000444415 TTF2Q9UNY4 1162 aaKnown RBP27.05■■□□□ 1.92
TRAF4-205ENST00000444415 TLL2Q9Y6L7 1015 aa27.05■■□□□ 1.92
TRAF4-205ENST00000444415 SPDYE2BA6NHP3 402 aa27.04■■□□□ 1.92
TRAF4-205ENST00000444415 ZBTB22O15209 634 aa27.04■■□□□ 1.92
TRAF4-205ENST00000444415 SPDYE6P0CI01 402 aa27.04■■□□□ 1.92
TRAF4-205ENST00000444415 G3BP1Q13283 466 aaKnown RBP eCLIP27.04■■□□□ 1.92
TRAF4-205ENST00000444415 SIRT2Q8IXJ6 389 aa27.04■■□□□ 1.92
TRAF4-205ENST00000444415 CDCA5Q96FF9 252 aa27.04■■□□□ 1.92
TRAF4-205ENST00000444415 XAGE2Q96GT9 111 aa27.04■■□□□ 1.92
TRAF4-205ENST00000444415 FRAT2O75474 233 aaPredicted RBP27.03■■□□□ 1.92
TRAF4-205ENST00000444415 SAPCD2Q86UD0 394 aa27.03■■□□□ 1.92
TRAF4-205ENST00000444415 ABT1Q9ULW3 272 aaKnown RBP27.03■■□□□ 1.92
TRAF4-205ENST00000444415 SURF6O75683 361 aaKnown RBP27.02■■□□□ 1.92
TRAF4-205ENST00000444415 VEGFBP49765 207 aa27.02■■□□□ 1.92
TRAF4-205ENST00000444415 DLGAP5Q15398 846 aa27.02■■□□□ 1.92
TRAF4-205ENST00000444415 TBC1D22AQ8WUA7 517 aa27.02■■□□□ 1.92
TRAF4-205ENST00000444415 THSD7BQ9C0I4 1608 aa27.02■■□□□ 1.92
TRAF4-205ENST00000444415 PRAMEF18Q5VWM3 479 aa27.01■■□□□ 1.91
TRAF4-205ENST00000444415 SERPINA10Q9UK55 444 aa27.01■■□□□ 1.91
TRAF4-205ENST00000444415 AKAP2Q9Y2D5 859 aa27.01■■□□□ 1.91
TRAF4-205ENST00000444415 RASGRF1Q13972 1273 aa27■■□□□ 1.91
TRAF4-205ENST00000444415 DEFB115Q30KQ5 88 aa27■■□□□ 1.91
TRAF4-205ENST00000444415 GOLGA6L2Q8N9W4 650 aaPredicted RBP27■■□□□ 1.91
TRAF4-205ENST00000444415 AKAP11Q9UKA4 1901 aa26.99■■□□□ 1.91
TRAF4-205ENST00000444415 CRKP46108 304 aa26.99■■□□□ 1.91
TRAF4-205ENST00000444415 CLRN2A0PK11 232 aa26.98■■□□□ 1.91
TRAF4-205ENST00000444415 PRDX5P30044 214 aa26.98■■□□□ 1.91
TRAF4-205ENST00000444415 TNNI3KQ59H18 835 aa26.98■■□□□ 1.91
TRAF4-205ENST00000444415 GPR108Q9NPR9 543 aa26.98■■□□□ 1.91
TRAF4-205ENST00000444415 EXOC6BQ9Y2D4 811 aa26.98■■□□□ 1.91
TRAF4-205ENST00000444415 FPGT-TNNI3KV9GXZ4 949 aa26.98■■□□□ 1.91
TRAF4-205ENST00000444415 PAPPA2Q9BXP8 1791 aa26.97■■□□□ 1.91
TRAF4-205ENST00000444415 SEMA3EO15041 775 aa26.97■■□□□ 1.91
TRAF4-205ENST00000444415 WDR66Q8TBY9 1149 aa26.97■■□□□ 1.91
TRAF4-205ENST00000444415 NEUROD6Q96NK8 337 aa26.97■■□□□ 1.91
TRAF4-205ENST00000444415 GBA2Q9HCG7 927 aaPredicted RBP26.97■■□□□ 1.91
TRAF4-205ENST00000444415 SALL1Q9NSC2 1324 aa26.97■■□□□ 1.91
TRAF4-205ENST00000444415 SSC5DA1L4H1 1573 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms