RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
COMMD1-203ENST00000444166 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 AOX1Q06278 1338 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 MYH3P11055 1940 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 OTOFQ9HC10 1997 aa13.05□□□□□ -0.32
COMMD1-203ENST00000444166 IREB2P48200 963 aaKnown RBP13.04□□□□□ -0.32
COMMD1-203ENST00000444166 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
COMMD1-203ENST00000444166 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
COMMD1-203ENST00000444166 ANKRD13AQ8IZ07 590 aa13.04□□□□□ -0.32
COMMD1-203ENST00000444166 BRI3BPQ8WY22 251 aa13.04□□□□□ -0.32
COMMD1-203ENST00000444166 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
COMMD1-203ENST00000444166 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
COMMD1-203ENST00000444166 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 SHISA4Q96DD7 197 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 CD209Q9NNX6 404 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
COMMD1-203ENST00000444166 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
COMMD1-203ENST00000444166 ZNF853P0CG23 659 aa13.02□□□□□ -0.33
COMMD1-203ENST00000444166 CCDC146Q8IYE0 955 aa13.02□□□□□ -0.33
COMMD1-203ENST00000444166 OPTNQ96CV9 577 aa13.02□□□□□ -0.33
COMMD1-203ENST00000444166 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
COMMD1-203ENST00000444166 RASA3Q14644 834 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
COMMD1-203ENST00000444166 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 SLC17A8Q8NDX2 589 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 ZFYVE28Q9HCC9 887 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 ZSWIM8A7E2V4 1837 aa13.01□□□□□ -0.33
COMMD1-203ENST00000444166 MYO1BO43795 1136 aa13□□□□□ -0.33
COMMD1-203ENST00000444166 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
COMMD1-203ENST00000444166 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
COMMD1-203ENST00000444166 PPP1R3FQ6ZSY5 799 aaPredicted RBP13□□□□□ -0.33
COMMD1-203ENST00000444166 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
COMMD1-203ENST00000444166 FAM43AQ8N2R8 423 aa13□□□□□ -0.33
COMMD1-203ENST00000444166 RUNDC1Q96C34 613 aa13□□□□□ -0.33
COMMD1-203ENST00000444166 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
COMMD1-203ENST00000444166 VEZTQ9HBM0 779 aa13□□□□□ -0.33
COMMD1-203ENST00000444166 MAP3K2Q9Y2U5 619 aa13□□□□□ -0.33
COMMD1-203ENST00000444166 CCL15-CCL14A0A0B4J2E2 113 aa12.99□□□□□ -0.33
COMMD1-203ENST00000444166 DDX58O95786 925 aaKnown RBP12.99□□□□□ -0.33
COMMD1-203ENST00000444166 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
COMMD1-203ENST00000444166 CCL15Q16663 113 aa12.99□□□□□ -0.33
COMMD1-203ENST00000444166 TEPSINQ96N21 525 aa12.99□□□□□ -0.33
COMMD1-203ENST00000444166 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
COMMD1-203ENST00000444166 H7C1W4 665 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 SNAP23O00161 211 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 TLR2O60603 784 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 IL1R1P14778 569 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 ITGA6P23229 1130 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 GTF2A2P52657 109 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 LACTBP83111 547 aaPredicted RBP12.98□□□□□ -0.33
COMMD1-203ENST00000444166 CHRNDQ07001 517 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 VGLL4Q14135 290 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 CDAN1Q8IWY9 1227 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 PLA2G12BQ9BX93 195 aa12.98□□□□□ -0.33
COMMD1-203ENST00000444166 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 NEURL1BA8MQ27 555 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
COMMD1-203ENST00000444166 GNRH1P01148 92 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 PRMT2P55345 433 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 MTFR1Q15390 333 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
COMMD1-203ENST00000444166 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 C8orf58Q8NAV2 365 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
COMMD1-203ENST00000444166 DPF3Q92784 378 aa12.97□□□□□ -0.33
COMMD1-203ENST00000444166 ZCCHC17Q9NP64 241 aaKnown RBP12.97□□□□□ -0.33
COMMD1-203ENST00000444166 CSF1RP07333 972 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 KCNJ4P48050 445 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 CASP7P55210 303 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 TNFAIP1Q13829 316 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 IFT57Q9NWB7 429 aa12.96□□□□□ -0.33
COMMD1-203ENST00000444166 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
COMMD1-203ENST00000444166 A0A1B0GUL6 1792 aa12.96□□□□□ -0.34
COMMD1-203ENST00000444166 A0A1W2PPC1 479 aa12.95□□□□□ -0.34
COMMD1-203ENST00000444166 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
COMMD1-203ENST00000444166 SOX1O00570 391 aaPredicted RBP12.95□□□□□ -0.34
COMMD1-203ENST00000444166 CTGFP29279 349 aa12.95□□□□□ -0.34
COMMD1-203ENST00000444166 GJA8P48165 433 aa12.95□□□□□ -0.34
COMMD1-203ENST00000444166 RALBP1Q15311 655 aa12.95□□□□□ -0.34
COMMD1-203ENST00000444166 ARAP2Q8WZ64 1704 aa12.95□□□□□ -0.34
COMMD1-203ENST00000444166 BTBD19C9JJ37 291 aa12.94□□□□□ -0.34
COMMD1-203ENST00000444166 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
COMMD1-203ENST00000444166 TAF5LO75529 589 aa12.94□□□□□ -0.34
COMMD1-203ENST00000444166 GJB1P08034 283 aa12.94□□□□□ -0.34
COMMD1-203ENST00000444166 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
COMMD1-203ENST00000444166 KIF22Q14807 665 aa12.94□□□□□ -0.34
COMMD1-203ENST00000444166 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms