RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 CAVIN4Q5BKX8 364 aa22.45■■□□□ 1.18
LRCH1-204ENST00000443945 USP50Q70EL3 339 aaPredicted RBP22.45■■□□□ 1.18
LRCH1-204ENST00000443945 AGBL3Q8NEM8 1001 aa22.45■■□□□ 1.18
LRCH1-204ENST00000443945 TDRD7Q8NHU6 1098 aaKnown RBP22.45■■□□□ 1.18
LRCH1-204ENST00000443945 SUPT16HQ9Y5B9 1047 aaKnown RBP22.45■■□□□ 1.18
LRCH1-204ENST00000443945 F8W031 263 aaPredicted RBP22.44■■□□□ 1.18
LRCH1-204ENST00000443945 USP17L8P0C7I0 530 aa22.44■■□□□ 1.18
LRCH1-204ENST00000443945 OS9Q13438 667 aaPredicted RBP22.44■■□□□ 1.18
LRCH1-204ENST00000443945 SIRT2Q8IXJ6 389 aa22.44■■□□□ 1.18
LRCH1-204ENST00000443945 FRAT2O75474 233 aaPredicted RBP22.43■■□□□ 1.18
LRCH1-204ENST00000443945 HTRA3P83110 453 aa22.43■■□□□ 1.18
LRCH1-204ENST00000443945 CHAF1AQ13111 956 aaPredicted RBP22.43■■□□□ 1.18
LRCH1-204ENST00000443945 CHMP4BQ9H444 224 aaKnown RBP22.43■■□□□ 1.18
LRCH1-204ENST00000443945 ASTN2O75129 1339 aaPredicted RBP22.43■■□□□ 1.18
LRCH1-204ENST00000443945 FMR1Q06787 632 aaKnown RBP eCLIP22.43■■□□□ 1.181e-10■■■■□ 20.6
LRCH1-204ENST00000443945 EXOC6BQ9Y2D4 811 aa22.43■■□□□ 1.18
LRCH1-204ENST00000443945 A0A1B0GUL7 405 aa22.42■■□□□ 1.18
LRCH1-204ENST00000443945 HSPA6P17066 643 aa22.42■■□□□ 1.18
LRCH1-204ENST00000443945 KIF4BQ2VIQ3 1234 aa22.42■■□□□ 1.18
LRCH1-204ENST00000443945 CNTROBQ8N137 903 aa22.42■■□□□ 1.18
LRCH1-204ENST00000443945 NEUROD6Q96NK8 337 aa22.42■■□□□ 1.18
LRCH1-204ENST00000443945 PHKA1P46020 1223 aa22.41■■□□□ 1.18
LRCH1-204ENST00000443945 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
LRCH1-204ENST00000443945 PCNTO95613 3336 aa22.41■■□□□ 1.18
LRCH1-204ENST00000443945 ZNF609O15014 1411 aa22.4■■□□□ 1.18
LRCH1-204ENST00000443945 MFSD14BQ5SR56 506 aa22.4■■□□□ 1.18
LRCH1-204ENST00000443945 DLK2Q6UY11 383 aa22.4■■□□□ 1.18
LRCH1-204ENST00000443945 MYOZ2Q9NPC6 264 aa22.4■■□□□ 1.18
LRCH1-204ENST00000443945 ITGBL1O95965 494 aaPredicted RBP22.4■■□□□ 1.18
LRCH1-204ENST00000443945 SCAF8Q9UPN6 1271 aaKnown RBP22.4■■□□□ 1.18
LRCH1-204ENST00000443945 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.18
LRCH1-204ENST00000443945 APBB1O00213 710 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 GRIK5Q16478 980 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 XAGE2Q96GT9 111 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 CRBNQ96SW2 442 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 NOP58Q9Y2X3 529 aaKnown RBP22.39■■□□□ 1.17
LRCH1-204ENST00000443945 PCDHAC2Q9Y5I4 1007 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 COL1A1P02452 1464 aaPredicted RBP22.39■■□□□ 1.17
LRCH1-204ENST00000443945 FAM205AQ6ZU69 1335 aa22.39■■□□□ 1.17
LRCH1-204ENST00000443945 TRAF5O00463 557 aa22.38■■□□□ 1.17
LRCH1-204ENST00000443945 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
LRCH1-204ENST00000443945 GLIS2Q9BZE0 524 aaPredicted RBP22.38■■□□□ 1.17
LRCH1-204ENST00000443945 RPAP2Q8IXW5 612 aaPredicted RBP22.38■■□□□ 1.17
LRCH1-204ENST00000443945 AKAP2Q9Y2D5 859 aa22.38■■□□□ 1.17
LRCH1-204ENST00000443945 NBPF9Q3BBW0 867 aa22.37■■□□□ 1.17
LRCH1-204ENST00000443945 CCDC102BQ68D86 513 aa22.37■■□□□ 1.17
LRCH1-204ENST00000443945 ARAP2Q8WZ64 1704 aa22.37■■□□□ 1.17
LRCH1-204ENST00000443945 GGA3Q9NZ52 723 aa22.37■■□□□ 1.17
LRCH1-204ENST00000443945 SCARF1Q14162 830 aa22.36■■□□□ 1.17
LRCH1-204ENST00000443945 TNNI3KQ59H18 835 aa22.35■■□□□ 1.17
LRCH1-204ENST00000443945 FPGT-TNNI3KV9GXZ4 949 aa22.35■■□□□ 1.17
LRCH1-204ENST00000443945 PASKQ96RG2 1323 aa22.35■■□□□ 1.17
LRCH1-204ENST00000443945 PGAP2Q9UHJ9 254 aa22.35■■□□□ 1.17
LRCH1-204ENST00000443945 ANGEL2Q5VTE6 544 aaKnown RBP22.34■■□□□ 1.17
LRCH1-204ENST00000443945 MYH13Q9UKX3 1938 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 POLR2AP24928 1970 aaKnown RBP22.34■■□□□ 1.17
LRCH1-204ENST00000443945 WNT10BO00744 389 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 HMMRO75330 724 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 APLP1P51693 650 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
LRCH1-204ENST00000443945 DBNDD2Q9BQY9 259 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 IL1RAPL2Q9NP60 686 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 TLR7Q9NYK1 1049 aaKnown RBP22.34■■□□□ 1.17
LRCH1-204ENST00000443945 HDAC9Q9UKV0 1011 aa22.34■■□□□ 1.17
LRCH1-204ENST00000443945 TTF2Q9UNY4 1162 aaKnown RBP22.34■■□□□ 1.17
LRCH1-204ENST00000443945 AOX1Q06278 1338 aa22.33■■□□□ 1.17
LRCH1-204ENST00000443945 ADM5C9JUS6 153 aa22.33■■□□□ 1.17
LRCH1-204ENST00000443945 RASGRF1Q13972 1273 aa22.33■■□□□ 1.17
LRCH1-204ENST00000443945 GORABQ5T7V8 394 aa22.33■■□□□ 1.17
LRCH1-204ENST00000443945 PI16Q6UXB8 463 aa22.33■■□□□ 1.17
LRCH1-204ENST00000443945 USP48Q86UV5 1035 aa22.33■■□□□ 1.17
LRCH1-204ENST00000443945 CCDC8Q9H0W5 538 aaPredicted RBP22.33■■□□□ 1.17
LRCH1-204ENST00000443945 FKBP1AP62942 108 aaKnown RBP22.32■■□□□ 1.16
LRCH1-204ENST00000443945 GNL3LQ9NVN8 582 aaKnown RBP22.32■■□□□ 1.16
LRCH1-204ENST00000443945 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
LRCH1-204ENST00000443945 KRT26Q7Z3Y9 468 aa22.32■■□□□ 1.16
LRCH1-204ENST00000443945 EAF2Q96CJ1 260 aaPredicted RBP22.32■■□□□ 1.16
LRCH1-204ENST00000443945 RBM5P52756 815 aaKnown RBP eCLIP22.31■■□□□ 1.16
LRCH1-204ENST00000443945 CFAP100Q494V2 611 aa22.31■■□□□ 1.16
LRCH1-204ENST00000443945 DCPSQ96C86 337 aaKnown RBP22.31■■□□□ 1.16
LRCH1-204ENST00000443945 ZNF408Q9H9D4 720 aa22.3■■□□□ 1.16
LRCH1-204ENST00000443945 DLGAP5Q15398 846 aa22.3■■□□□ 1.16
LRCH1-204ENST00000443945 CDC37L1Q7L3B6 337 aa22.3■■□□□ 1.16
LRCH1-204ENST00000443945 RHPN1Q8TCX5 695 aa22.3■■□□□ 1.16
LRCH1-204ENST00000443945 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
LRCH1-204ENST00000443945 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
LRCH1-204ENST00000443945 PRDX5P30044 214 aa22.29■■□□□ 1.16
LRCH1-204ENST00000443945 PRMT6Q96LA8 375 aaPredicted RBP22.29■■□□□ 1.16
LRCH1-204ENST00000443945 GPR108Q9NPR9 543 aa22.29■■□□□ 1.16
LRCH1-204ENST00000443945 IRX6P78412 446 aaPredicted RBP22.29■■□□□ 1.16
LRCH1-204ENST00000443945 ZBED3Q96IU2 234 aaPredicted RBP22.29■■□□□ 1.16
LRCH1-204ENST00000443945 DENND2AQ9ULE3 1009 aa22.29■■□□□ 1.16
LRCH1-204ENST00000443945 CLRN2A0PK11 232 aa22.28■■□□□ 1.16
LRCH1-204ENST00000443945 PRAMEF18Q5VWM3 479 aa22.28■■□□□ 1.16
LRCH1-204ENST00000443945 AACSQ86V21 672 aa22.28■■□□□ 1.16
LRCH1-204ENST00000443945 ERC1Q8IUD2 1116 aa22.28■■□□□ 1.16
LRCH1-204ENST00000443945 WDR66Q8TBY9 1149 aa22.28■■□□□ 1.16
LRCH1-204ENST00000443945 CST9Q5W186 159 aa22.27■■□□□ 1.16
LRCH1-204ENST00000443945 SULF1Q8IWU6 871 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms