RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 GPAA1O43292 621 aa17.45■□□□□ 0.38
LINC00299-202ENST00000442956 KRT32Q14532 448 aa17.45■□□□□ 0.38
LINC00299-202ENST00000442956 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
LINC00299-202ENST00000442956 ANO8Q9HCE9 1232 aaPredicted RBP17.45■□□□□ 0.38
LINC00299-202ENST00000442956 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
LINC00299-202ENST00000442956 TCRBV5S4A2TA0A5A2 114 aa17.44■□□□□ 0.38
LINC00299-202ENST00000442956 KLRG2A4D1S0 409 aaPredicted RBP17.44■□□□□ 0.38
LINC00299-202ENST00000442956 MMP10P09238 476 aa17.44■□□□□ 0.38
LINC00299-202ENST00000442956 A0A1B0GUL6 1792 aa17.44■□□□□ 0.38
LINC00299-202ENST00000442956 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
LINC00299-202ENST00000442956 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
LINC00299-202ENST00000442956 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
LINC00299-202ENST00000442956 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
LINC00299-202ENST00000442956 RGPD3A6NKT7 1758 aaPredicted RBP17.44■□□□□ 0.38
LINC00299-202ENST00000442956 RGPD4Q7Z3J3 1758 aa17.44■□□□□ 0.38
LINC00299-202ENST00000442956 FOXP2O15409 715 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 CUL4AQ13619 759 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
LINC00299-202ENST00000442956 BRIP1Q9BX63 1249 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 HIBADHP31937 336 aaKnown RBP17.43■□□□□ 0.38
LINC00299-202ENST00000442956 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 LIMCH1Q9UPQ0 1083 aa17.43■□□□□ 0.38
LINC00299-202ENST00000442956 XDHP47989 1333 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 SLC15A2Q16348 729 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 LARP6Q9BRS8 491 aaKnown RBP17.42■□□□□ 0.38
LINC00299-202ENST00000442956 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 PARP3Q9Y6F1 533 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
LINC00299-202ENST00000442956 SEMA3EO15041 775 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
LINC00299-202ENST00000442956 BBOX1O75936 387 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 TTLL5Q6EMB2 1281 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 TXNRD3Q86VQ6 643 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 CWC22Q9HCG8 908 aaKnown RBP17.42■□□□□ 0.38
LINC00299-202ENST00000442956 ABCF2Q9UG63 623 aa17.42■□□□□ 0.38
LINC00299-202ENST00000442956 NEK1Q96PY6 1258 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 CTNNA3Q9UI47 895 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 IRS2Q9Y4H2 1338 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 A0A0G2JLW4 131 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 FGAP02671 866 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
LINC00299-202ENST00000442956 GPSM2P81274 684 aa17.4■□□□□ 0.38
LINC00299-202ENST00000442956 STOX1Q6ZVD7 989 aa17.4■□□□□ 0.38
LINC00299-202ENST00000442956 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
LINC00299-202ENST00000442956 TCEANC2Q96MN5 208 aa17.4■□□□□ 0.38
LINC00299-202ENST00000442956 SF3B2Q13435 895 aaKnown RBP17.39■□□□□ 0.38
LINC00299-202ENST00000442956 STRBPQ96SI9 672 aaKnown RBP17.39■□□□□ 0.38
LINC00299-202ENST00000442956 RAI14Q9P0K7 980 aa17.39■□□□□ 0.38
LINC00299-202ENST00000442956 NSFL1CQ9UNZ2 370 aaKnown RBP17.39■□□□□ 0.38
LINC00299-202ENST00000442956 MYH7P12883 1935 aa17.39■□□□□ 0.37
LINC00299-202ENST00000442956 MBD4O95243 580 aa17.38■□□□□ 0.37
LINC00299-202ENST00000442956 SRGNP10124 158 aa17.38■□□□□ 0.37
LINC00299-202ENST00000442956 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
LINC00299-202ENST00000442956 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
LINC00299-202ENST00000442956 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
LINC00299-202ENST00000442956 E7EWF7 191 aa17.38■□□□□ 0.37
LINC00299-202ENST00000442956 BAG6P46379 1132 aa17.38■□□□□ 0.37
LINC00299-202ENST00000442956 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
LINC00299-202ENST00000442956 ALDH8A1Q9H2A2 487 aaPredicted RBP17.38■□□□□ 0.37
LINC00299-202ENST00000442956 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
LINC00299-202ENST00000442956 UFL1O94874 794 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 APPP05067 770 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 CYP7A1P22680 504 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 PDE6BP35913 854 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 HAND2P61296 217 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
LINC00299-202ENST00000442956 GPR101Q96P66 508 aaPredicted RBP17.37■□□□□ 0.37
LINC00299-202ENST00000442956 LARGE1O95461 756 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 HMGB1P09429 215 aaKnown RBP17.37■□□□□ 0.37
LINC00299-202ENST00000442956 NPR1P16066 1061 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
LINC00299-202ENST00000442956 ARMT1Q9H993 441 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 DOCK2Q92608 1830 aa17.37■□□□□ 0.37
LINC00299-202ENST00000442956 NRXN2Q9P2S2 1712 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 PPEF1O14829 653 aaPredicted RBP17.36■□□□□ 0.37
LINC00299-202ENST00000442956 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 C15orf52Q6ZUT6 534 aaKnown RBP17.36■□□□□ 0.37
LINC00299-202ENST00000442956 TMC4Q7Z404 712 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
LINC00299-202ENST00000442956 SH2B1Q9NRF2 756 aaPredicted RBP17.36■□□□□ 0.37
LINC00299-202ENST00000442956 TPCN1Q9ULQ1 816 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 NUCB2P80303 420 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 TOB2Q14106 344 aaPredicted RBP17.36■□□□□ 0.37
LINC00299-202ENST00000442956 MIGA1Q8NAN2 632 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
LINC00299-202ENST00000442956 ZNF213O14771 459 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 ZBTB22O15209 634 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 DHX32Q7L7V1 743 aaKnown RBP17.35■□□□□ 0.37
LINC00299-202ENST00000442956 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 ADGRA1Q86SQ6 560 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 LCORLQ8N3X6 602 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
LINC00299-202ENST00000442956 PKP1Q13835 747 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms