RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CLEC11AQ9Y240 323 aa18.58■□□□□ 0.56
CSNK1E-210ENST00000442216 A0A1B0GUL7 405 aa18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 SHTN1A0MZ66 631 aa18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 OS9Q13438 667 aaPredicted RBP18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 ERC1Q8IUD2 1116 aa18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 GNL3LQ9NVN8 582 aaKnown RBP18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 HDAC9Q9UKV0 1011 aa18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 ECM29Q5VYK3 1845 aa18.57■□□□□ 0.56
CSNK1E-210ENST00000442216 SEMA3EO15041 775 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 HIRAP54198 1017 aaPredicted RBP18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 TIMM10P62072 90 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 KIF4BQ2VIQ3 1234 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 SAMD7Q7Z3H4 446 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 SIRT2Q8IXJ6 389 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 TRPM4Q8TD43 1214 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 TBC1D22AQ8WUA7 517 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 MXD3Q9BW11 206 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 TRPM7Q96QT4 1865 aa18.56■□□□□ 0.56
CSNK1E-210ENST00000442216 HSPA6P17066 643 aa18.55■□□□□ 0.56
CSNK1E-210ENST00000442216 CERS5Q8N5B7 392 aa18.55■□□□□ 0.56
CSNK1E-210ENST00000442216 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
CSNK1E-210ENST00000442216 AAMPQ13685 434 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 TBC1D10BQ4KMP7 808 aaPredicted RBP18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 CCDC102BQ68D86 513 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 KIAA0825Q8IV33 1275 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 XAGE2Q96GT9 111 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 SUGT1Q9Y2Z0 365 aa18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.54■□□□□ 0.56
CSNK1E-210ENST00000442216 PASKQ96RG2 1323 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 ITGBL1O95965 494 aaPredicted RBP18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 EGFRP00533 1210 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 WDR66Q8TBY9 1149 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 NEUROD6Q96NK8 337 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 DENND2AQ9ULE3 1009 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 IQSEC3Q9UPP2 1182 aaPredicted RBP18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 FPGT-TNNI3KV9GXZ4 949 aa18.53■□□□□ 0.56
CSNK1E-210ENST00000442216 PDS5AQ29RF7 1337 aaKnown RBP18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 RAB11FIP3O75154 756 aa18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 ADORA1P30542 326 aa18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 PHKA1P46020 1223 aa18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 RBM26Q5T8P6 1007 aaKnown RBP18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 MTMR14Q8NCE2 650 aa18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.56
CSNK1E-210ENST00000442216 APLP1P51693 650 aa18.51■□□□□ 0.55
CSNK1E-210ENST00000442216 CHAF1AQ13111 956 aaPredicted RBP18.51■□□□□ 0.55
CSNK1E-210ENST00000442216 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
CSNK1E-210ENST00000442216 CRBNQ96SW2 442 aa18.51■□□□□ 0.55
CSNK1E-210ENST00000442216 JAG2Q9Y219 1238 aa18.51■□□□□ 0.55
CSNK1E-210ENST00000442216 AKAP11Q9UKA4 1901 aa18.51■□□□□ 0.55
CSNK1E-210ENST00000442216 PITPNM2Q9BZ72 1349 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 SALL1Q9NSC2 1324 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 SCARF1Q14162 830 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 GORABQ5T7V8 394 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 CDC37L1Q7L3B6 337 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 ZBED3Q96IU2 234 aaPredicted RBP18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
CSNK1E-210ENST00000442216 MAST3O60307 1309 aa18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 WNT10BO00744 389 aa18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 UQCRFS1P1P0C7P4 283 aa18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 ZGPATQ8N5A5 531 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 DCPSQ96C86 337 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 SERPINA10Q9UK55 444 aa18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 TTF2Q9UNY4 1162 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 COL1A1P02452 1464 aaPredicted RBP18.49■□□□□ 0.55
CSNK1E-210ENST00000442216 DLGAP5Q15398 846 aa18.48■□□□□ 0.55
CSNK1E-210ENST00000442216 CCDC158Q5M9N0 1113 aa18.48■□□□□ 0.55
CSNK1E-210ENST00000442216 EAF2Q96CJ1 260 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-210ENST00000442216 ZNF512BQ96KM6 892 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-210ENST00000442216 F8W031 263 aaPredicted RBP18.47■□□□□ 0.55
CSNK1E-210ENST00000442216 RASGRF1Q13972 1273 aa18.47■□□□□ 0.55
CSNK1E-210ENST00000442216 NBPF9Q3BBW0 867 aa18.47■□□□□ 0.55
CSNK1E-210ENST00000442216 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
CSNK1E-210ENST00000442216 GGA3Q9NZ52 723 aa18.47■□□□□ 0.55
CSNK1E-210ENST00000442216 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
CSNK1E-210ENST00000442216 CFAP100Q494V2 611 aa18.46■□□□□ 0.55
CSNK1E-210ENST00000442216 DBNDD2Q9BQY9 259 aa18.46■□□□□ 0.55
CSNK1E-210ENST00000442216 DCTPP1Q9H773 170 aa18.46■□□□□ 0.55
CSNK1E-210ENST00000442216 PCDHB15Q9Y5E8 787 aa18.46■□□□□ 0.55
CSNK1E-210ENST00000442216 SPDYE2BA6NHP3 402 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 MYO1BO43795 1136 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 SPDYE6P0CI01 402 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 TTC39AQ5SRH9 613 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 KRT26Q7Z3Y9 468 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 GLIS2Q9BZE0 524 aaPredicted RBP18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
CSNK1E-210ENST00000442216 IGSF3O75054 1194 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 LDHBP07195 334 aaKnown RBP18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 GRIK5Q16478 980 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms