RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 NUTM2GQ5VZR2 741 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 VSTM4Q8IW00 320 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 NSUN7Q8NE18 718 aaKnown RBP9.1□□□□□ -0.95
LMO3-208ENST00000441439 GOLGA1Q92805 767 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 LAMB2P55268 1798 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 NRAPQ86VF7 1730 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 KDM6AO15550 1401 aaPredicted RBP9.1□□□□□ -0.95
LMO3-208ENST00000441439 PHLPP1O60346 1717 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 TAF5LO75529 589 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
LMO3-208ENST00000441439 GSCP56915 257 aaPredicted RBP9.1□□□□□ -0.95
LMO3-208ENST00000441439 TMC6Q7Z403 805 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 TOGARAM1Q9Y4F4 1720 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 STX10O60499 249 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 SMC2O95347 1197 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
LMO3-208ENST00000441439 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
LMO3-208ENST00000441439 PPM1EQ8WY54 764 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 CARD6Q9BX69 1037 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 VIPAS39Q9H9C1 493 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 IFNKQ9P0W0 207 aa9.1□□□□□ -0.95
LMO3-208ENST00000441439 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 GNAT3A8MTJ3 354 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 BEND6Q5SZJ8 279 aaPredicted RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 PARD6BQ9BYG5 372 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 ANKRD36CQ5JPF3 1778 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 H3BQF6 201 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 SEC31AO94979 1220 aaKnown RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 PPP2R3AQ06190 1150 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 TAF7Q15545 349 aaPredicted RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 KCNG4Q8TDN1 519 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 USP28Q96RU2 1077 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 CEP89Q96ST8 783 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 MYCBPQ99417 103 aaPredicted RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 CHMP3Q9Y3E7 222 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 ARAP2Q8WZ64 1704 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 AARSP49588 968 aaKnown RBP eCLIP9.09□□□□□ -0.95
LMO3-208ENST00000441439 PSEN1P49768 467 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 FANCCQ00597 558 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 SCRN1Q12765 414 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 AXDND1Q5T1B0 1012 aaPredicted RBP9.09□□□□□ -0.95
LMO3-208ENST00000441439 GORABQ5T7V8 394 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 HDXQ7Z353 690 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 FAM71BQ8TC56 605 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 NEK1Q96PY6 1258 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 FAM107BQ9H098 131 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 PPP2R2CQ9Y2T4 447 aa9.09□□□□□ -0.95
LMO3-208ENST00000441439 JAK2O60674 1132 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 CTDNEP1O95476 244 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 FECHP22830 423 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 GTF2A1P52655 376 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 EFCAB13Q8IY85 973 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 FSIP1Q8NA03 581 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 DNAAF4Q8WXU2 420 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 TACO1Q9BSH4 297 aaKnown RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 MED4Q9NPJ6 270 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 NWD2Q9ULI1 1742 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 A0A0D9SFI3 127 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 H3BQV1 296 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 TRIM66O15016 1216 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 POLR3GO15318 223 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 TNNT3P45378 269 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 EXOSC10Q01780 885 aaKnown RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 DPCR1Q3MIW9 517 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 TTC31Q49AM3 519 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 LEKR1Q6ZMV7 388 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 LINC00301Q8NCQ3 95 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 ZNF274Q96GC6 653 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 FAM227BQ96M60 508 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 PCDHA7Q9UN72 937 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 L1RE1Q9UN81 338 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 JRKLQ9Y4A0 524 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 CASZ1Q86V15 1759 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 SH3TC1Q8TE82 1336 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 NBPF7P0C2Y1 421 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 COL9A3Q14050 684 aaPredicted RBP9.08□□□□□ -0.96
LMO3-208ENST00000441439 HSP90AB2PQ58FF8 381 aa9.08□□□□□ -0.96
LMO3-208ENST00000441439 PALLDQ8WX93 1383 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 SRGAP1Q7Z6B7 1085 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 CEP112Q8N8E3 955 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 HPSEQ9Y251 543 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 SOX12O15370 315 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 IFIT2P09913 472 aaKnown RBP9.07□□□□□ -0.96
LMO3-208ENST00000441439 CMA1P23946 247 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 BRAPQ7Z569 592 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 HOMER1Q86YM7 354 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 C10orf67Q8IYJ2 551 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 ANKZF1Q9H8Y5 726 aa9.07□□□□□ -0.96
LMO3-208ENST00000441439 MIS18AQ9NYP9 233 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms