RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 RGPD8O14715 1765 aaPredicted RBP7.34□□□□□ -1.24
CNOT1-202ENST00000441024 EYA2O00167 538 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 CWF19L2Q2TBE0 894 aaKnown RBP7.33□□□□□ -1.24
CNOT1-202ENST00000441024 KIF4BQ2VIQ3 1234 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 CCDC82Q8N4S0 544 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 ERMNQ8TAM6 284 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 JARID2Q92833 1246 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-202ENST00000441024 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
CNOT1-202ENST00000441024 FMN2Q9NZ56 1722 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 ABCC4O15439 1325 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
CNOT1-202ENST00000441024 CETN1Q12798 172 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 TPTE2Q6XPS3 522 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 SEPT11Q9NVA2 429 aaKnown RBP7.33□□□□□ -1.24
CNOT1-202ENST00000441024 RBM28Q9NW13 759 aaKnown RBP7.33□□□□□ -1.24
CNOT1-202ENST00000441024 KIF20BQ96Q89 1820 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 KRT24Q2M2I5 525 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 LMO7Q8WWI1 1683 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 TSPY3P0CV98 308 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 TSPY8P0CW00 308 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 PAFAH1B1P43034 410 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 G2E3Q7L622 706 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 NCKAP5LQ9HCH0 1330 aa7.33□□□□□ -1.24
CNOT1-202ENST00000441024 SPTLC2O15270 562 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 URI1O94763 535 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 KIAA0754O94854 1291 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 CERS3Q8IU89 383 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 TRMT2AQ8IZ69 625 aaKnown RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 ALS2CR12Q96Q35 445 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 CRACR2AQ9BSW2 395 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 BCL11BQ9C0K0 894 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 PLEKHG1Q9ULL1 1385 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 SSH2Q76I76 1423 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 TRIM75PA6NK02 468 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 RPS6KB1P23443 525 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 SNW1Q13573 536 aaKnown RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 ZRSR2Q15696 482 aaKnown RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 NAP1L4Q99733 375 aaKnown RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 EXOC1Q9NV70 894 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 PPP1R1BQ9UD71 204 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 DENND2AQ9ULE3 1009 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 FPGT-TNNI3KV9GXZ4 949 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 HCLS1P14317 486 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 MATR3P43243 847 aaKnown RBP eCLIP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 GIMAP6Q6P9H5 292 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 CCDC144CPQ8IYA2 1237 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 TMEM87BQ96K49 555 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 NAA15Q9BXJ9 866 aaKnown RBP7.32□□□□□ -1.24
CNOT1-202ENST00000441024 ADAMTS7Q9UKP4 1686 aa7.32□□□□□ -1.24
CNOT1-202ENST00000441024 USP19O94966 1318 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 CCDC172P0C7W6 258 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 DNM1Q05193 864 aaKnown RBP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 CCDC40Q4G0X9 1142 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 ANO6Q4KMQ2 910 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 C6orf50Q9HD87 102 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 ERBB4Q15303 1308 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 GOLGA6L7A0A1B0GV03 622 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 BIN1O00499 593 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 SGSM2O43147 1006 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 CLCN1P35523 988 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 EIF4A1P60842 406 aaKnown RBP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 TUBB4BP68371 445 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 SEPT7Q16181 437 aaKnown RBP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 IFI16Q16666 785 aaKnown RBP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 DACT1Q9NYF0 836 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 WNK3Q9BYP7 1800 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 PTPDC1A2A3K4 754 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 ERVV-2B6SEH9 535 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 XRCC6P12956 609 aaKnown RBP eCLIP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 TAF3Q5VWG9 929 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 TM6SF1Q9BZW5 370 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 TECPR2O15040 1411 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 PDE8AO60658 829 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 KRT2P35908 639 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 UBASH3AP57075 661 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 PPP2R5BQ15173 497 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 CCDC102AQ96A19 550 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 TSPYL1Q9H0U9 437 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 HDAC9Q9UKV0 1011 aa7.31□□□□□ -1.24
CNOT1-202ENST00000441024 RTCBQ9Y3I0 505 aaKnown RBP7.31□□□□□ -1.24
CNOT1-202ENST00000441024 MYO1BO43795 1136 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 PPP1R2P41236 205 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 STAT6P42226 847 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 RRAGBQ5VZM2 374 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 TYRO3Q06418 890 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 CEP135Q66GS9 1140 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 SLC27A2O14975 620 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 N4BP3O15049 544 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 PUM3Q15397 648 aaKnown RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 CABLES1Q8TDN4 633 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 MPHOSPH6Q99547 160 aaKnown RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 SRRTQ9BXP5 876 aaKnown RBP7.3□□□□□ -1.24
CNOT1-202ENST00000441024 LRRC2Q9BYS8 371 aa7.3□□□□□ -1.24
CNOT1-202ENST00000441024 N4BP2Q86UW6 1770 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms