RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
SMC2-204ENST00000440179 TTLL5Q6EMB2 1281 aa17.61■□□□□ 0.41
SMC2-204ENST00000440179 ZNF333Q96JL9 665 aa17.61■□□□□ 0.41
SMC2-204ENST00000440179 GREM2Q9H772 168 aa17.61■□□□□ 0.41
SMC2-204ENST00000440179 EFCC1Q9HA90 598 aa17.61■□□□□ 0.41
SMC2-204ENST00000440179 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.61■□□□□ 0.41
SMC2-204ENST00000440179 LAMA3Q16787 3333 aa17.61■□□□□ 0.41
SMC2-204ENST00000440179 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
SMC2-204ENST00000440179 PTPN18Q99952 460 aa17.6■□□□□ 0.41
SMC2-204ENST00000440179 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
SMC2-204ENST00000440179 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
SMC2-204ENST00000440179 PCDHAC2Q9Y5I4 1007 aa17.59■□□□□ 0.41
SMC2-204ENST00000440179 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
SMC2-204ENST00000440179 PPP1R12BO60237 982 aaPredicted RBP17.58■□□□□ 0.4
SMC2-204ENST00000440179 GTF2IP78347 998 aa17.58■□□□□ 0.4
SMC2-204ENST00000440179 SP3Q02447 781 aa17.58■□□□□ 0.4
SMC2-204ENST00000440179 MYH3P11055 1940 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 AOX1Q06278 1338 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 TESPA1A2RU30 521 aaPredicted RBP17.57■□□□□ 0.4
SMC2-204ENST00000440179 UNCXA6NJT0 531 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 PIP4P2Q8N4L2 257 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 CERS5Q8N5B7 392 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 OTUD5Q96G74 571 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 LEMD3Q9Y2U8 911 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 PPP2R3BQ9Y5P8 575 aa17.57■□□□□ 0.4
SMC2-204ENST00000440179 ZNF804BA4D1E1 1349 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 H0YGN5 161 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 IGKV5-2P06315 115 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 ZNF853P0CG23 659 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 DLGAP5Q15398 846 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 MTMR14Q8NCE2 650 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 PTCH2Q9Y6C5 1203 aa17.56■□□□□ 0.4
SMC2-204ENST00000440179 USP2O75604 605 aaPredicted RBP17.55■□□□□ 0.4
SMC2-204ENST00000440179 NBPF12Q5TAG4 269 aaPredicted RBP17.55■□□□□ 0.4
SMC2-204ENST00000440179 OTUD7BQ6GQQ9 843 aa17.55■□□□□ 0.4
SMC2-204ENST00000440179 RUNDC1Q96C34 613 aa17.55■□□□□ 0.4
SMC2-204ENST00000440179 ECM29Q5VYK3 1845 aa17.55■□□□□ 0.4
SMC2-204ENST00000440179 OTOFQ9HC10 1997 aa17.55■□□□□ 0.4
SMC2-204ENST00000440179 IRS2Q9Y4H2 1338 aa17.54■□□□□ 0.4
SMC2-204ENST00000440179 CLRN2A0PK11 232 aa17.54■□□□□ 0.4
SMC2-204ENST00000440179 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
SMC2-204ENST00000440179 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMC2-204ENST00000440179 MS4A4AQ96JQ5 239 aa17.54■□□□□ 0.4
SMC2-204ENST00000440179 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
SMC2-204ENST00000440179 IREB2P48200 963 aaKnown RBP17.53■□□□□ 0.4
SMC2-204ENST00000440179 SUPT20HL1Q3ZLR7 823 aa17.53■□□□□ 0.4
SMC2-204ENST00000440179 SLC9C1Q4G0N8 1177 aa17.53■□□□□ 0.4
SMC2-204ENST00000440179 CD209Q9NNX6 404 aa17.53■□□□□ 0.4
SMC2-204ENST00000440179 ANKRD13AQ8IZ07 590 aa17.52■□□□□ 0.4
SMC2-204ENST00000440179 BRI3BPQ8WY22 251 aa17.52■□□□□ 0.4
SMC2-204ENST00000440179 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
SMC2-204ENST00000440179 SNAP23O00161 211 aa17.51■□□□□ 0.39
SMC2-204ENST00000440179 DDX58O95786 925 aaKnown RBP17.51■□□□□ 0.39
SMC2-204ENST00000440179 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
SMC2-204ENST00000440179 SLC4A8Q2Y0W8 1093 aa17.51■□□□□ 0.39
SMC2-204ENST00000440179 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
SMC2-204ENST00000440179 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
SMC2-204ENST00000440179 OPTNQ96CV9 577 aa17.51■□□□□ 0.39
SMC2-204ENST00000440179 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
SMC2-204ENST00000440179 PI4KAP2A4QPH2 592 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 MYCP01106 439 aaPredicted RBP17.5■□□□□ 0.39
SMC2-204ENST00000440179 RASA3Q14644 834 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 RALBP1Q15311 655 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 CWF19L2Q2TBE0 894 aaKnown RBP17.5■□□□□ 0.39
SMC2-204ENST00000440179 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 PI4KAP1Q8N8J0 262 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 VEZTQ9HBM0 779 aa17.5■□□□□ 0.39
SMC2-204ENST00000440179 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 F8W031 263 aaPredicted RBP17.49■□□□□ 0.39
SMC2-204ENST00000440179 H7C1W4 665 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 ITGA6P23229 1130 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 CHRNDQ07001 517 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 TAF1CQ15572 869 aaPredicted RBP17.49■□□□□ 0.39
SMC2-204ENST00000440179 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 UBE3BQ7Z3V4 1068 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 CDAN1Q8IWY9 1227 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 SH3TC2Q8TF17 1288 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
SMC2-204ENST00000440179 MYO1BO43795 1136 aa17.48■□□□□ 0.39
SMC2-204ENST00000440179 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
SMC2-204ENST00000440179 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
SMC2-204ENST00000440179 FAM43AQ8N2R8 423 aa17.48■□□□□ 0.39
SMC2-204ENST00000440179 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
SMC2-204ENST00000440179 ARHGAP39Q9C0H5 1083 aa17.48■□□□□ 0.39
SMC2-204ENST00000440179 RBM27Q9P2N5 1060 aaKnown RBP17.48■□□□□ 0.39
SMC2-204ENST00000440179 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
SMC2-204ENST00000440179 IL1R1P14778 569 aa17.47■□□□□ 0.39
SMC2-204ENST00000440179 KCNJ4P48050 445 aa17.47■□□□□ 0.39
SMC2-204ENST00000440179 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
SMC2-204ENST00000440179 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
SMC2-204ENST00000440179 MPHOSPH8Q99549 860 aa17.47■□□□□ 0.39
SMC2-204ENST00000440179 ZFYVE28Q9HCC9 887 aa17.47■□□□□ 0.39
SMC2-204ENST00000440179 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
SMC2-204ENST00000440179 CSF1RP07333 972 aa17.46■□□□□ 0.39
SMC2-204ENST00000440179 CASP7P55210 303 aa17.46■□□□□ 0.39
SMC2-204ENST00000440179 FKBP1AP62942 108 aaKnown RBP17.46■□□□□ 0.39
SMC2-204ENST00000440179 CCL15Q16663 113 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms