RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FOXD4L6Q3SYB3 417 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 ARTNQ5T4W7 220 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 FOXD4L3Q6VB84 417 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 GALNT11Q8NCW6 608 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 GIMAP7Q8NHV1 300 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 ASAP3Q8TDY4 903 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 SLC7A3Q8WY07 619 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 NXPE3Q969Y0 559 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 ZKSCAN3Q9BRR0 538 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 RUSC1Q9BVN2 902 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 ZFYVE28Q9HCC9 887 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 ANO2Q9NQ90 1003 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 STOML1Q9UBI4 398 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 RNF112Q9ULX5 631 aa5.66□□□□□ -1.5
HMGB3P11-201ENST00000440127 RETREG2Q8NC44 543 aa5.65□□□□□ -1.5
HMGB3P11-201ENST00000440127 TMC1Q8TDI8 760 aa5.65□□□□□ -1.5
HMGB3P11-201ENST00000440127 DMRTB1Q96MA1 342 aa5.65□□□□□ -1.5
HMGB3P11-201ENST00000440127 YIPF2Q9BWQ6 316 aa5.65□□□□□ -1.5
HMGB3P11-201ENST00000440127 CYP4F12Q9HCS2 524 aa5.65□□□□□ -1.5
HMGB3P11-201ENST00000440127 FOXD3Q9UJU5 478 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P11-201ENST00000440127 NFKBIEO00221 500 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 CPNE3O75131 537 aaKnown RBP5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 ALX3O95076 343 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 GRIK1P39086 918 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 SERPINB4P48594 390 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 NLRP12P59046 1061 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 AGGF1Q8N302 714 aaeCLIP5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 KLHDC7BQ96G42 594 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 MYRFLQ96LU7 910 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 DNAJC25Q9H1X3 360 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 CCDC87Q9NVE4 849 aa5.64□□□□□ -1.51
HMGB3P11-201ENST00000440127 MEGF11A6BM72 1044 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 NUTM2GQ5VZR2 741 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 KIAA1211Q6ZU35 1233 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 GALNT12Q8IXK2 581 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 UBASH3BQ8TF42 649 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 FAM46AQ96IP4 442 aaKnown RBP5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 USP26Q9BXU7 913 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 LIN7BQ9HAP6 207 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
HMGB3P11-201ENST00000440127 PATL2C9JE40 543 aaKnown RBP5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 WISP1O95388 367 aa5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 BRD1O95696 1058 aa5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 IGLV1-40P01703 118 aa5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 CYP11A1P05108 521 aa5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 ACPPP15309 386 aa5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 TXNDC2Q86VQ3 553 aa5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 CLEC4MQ9H2X3 399 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P11-201ENST00000440127 CARNS1A5YM72 827 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 ABCC9O60706 1549 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 ADAM11O75078 769 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 CPSF6Q16630 551 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 INTS5Q6P9B9 1019 aaKnown RBP5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 VN1R5Q7Z5H4 357 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 CLEC10AQ8IUN9 316 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 CCNJLQ8IV13 435 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 FAM129BQ96TA1 746 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 DBNDD2Q9BQY9 259 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 EHD4Q9H223 541 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 KCNF1Q9H3M0 494 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 SUGCTQ9HAC7 445 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 PPP4R2Q9NY27 417 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
HMGB3P11-201ENST00000440127 A0A096LPE4 126 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 A0A1W2PPZ6 126 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 ESRRAP11474 423 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 ARHGAP4P98171 946 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 GSTM4Q03013 218 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 PTPN12Q05209 780 aaKnown RBP5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 PCDH1Q08174 1060 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 KIAA0319Q5VV43 1072 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 RNF43Q68DV7 783 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 FAM20CQ8IXL6 584 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 SMG8Q8ND04 991 aaKnown RBP5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 ALKBH8Q96BT7 664 aaKnown RBP5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 HHIPQ96QV1 700 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 UBL7Q96S82 380 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 RBCK1Q9BYM8 510 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 PCMTD2Q9NV79 361 aa5.6□□□□□ -1.51
HMGB3P11-201ENST00000440127 NACADO15069 1562 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 A0A1W2PP55 124 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 SOX1O00570 391 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 DDX3YO15523 660 aaKnown RBP5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 COBLO75128 1261 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 GADD45BO75293 160 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 TRPA1O75762 1119 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 BMP3P12645 472 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 NFIAQ12857 509 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 AP3B2Q13367 1082 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 PEAR1Q5VY43 1037 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 BEND4Q6ZU67 534 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 C12orf50Q8NA57 414 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 FAM83CQ9BQN1 747 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 CORO1BQ9BR76 489 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 LATS2Q9NRM7 1088 aa5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 BIN2Q9UBW5 565 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P11-201ENST00000440127 GNEQ9Y223 722 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms