RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ZSCAN25Q6NSZ9 544 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 FBXL16Q8N461 479 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 VGLL2Q8N8G2 317 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 NCOA7Q8NI08 942 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 TTC12Q9H892 705 aaPredicted RBP14.23□□□□□ -0.13
HDAC8-214ENST00000439122 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 NWD2Q9ULI1 1742 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 TPM2P07951 284 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
HDAC8-214ENST00000439122 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
HDAC8-214ENST00000439122 LUZP1Q86V48 1076 aa14.23□□□□□ -0.13
HDAC8-214ENST00000439122 MYH3P11055 1940 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 ERVV-1B6SEH8 477 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 ADD2P35612 726 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 EVCP57679 992 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 TTF1Q15361 905 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-214ENST00000439122 SASS6Q6UVJ0 657 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 MB21D2Q8IYB1 491 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-214ENST00000439122 ZNF396Q96N95 335 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-214ENST00000439122 MYH7P12883 1935 aa14.22□□□□□ -0.13
HDAC8-214ENST00000439122 GOLGA8BA8MQT2 603 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 APPP05067 770 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 FDPSP14324 419 aaKnown RBP14.21□□□□□ -0.13
HDAC8-214ENST00000439122 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 RBM43Q6ZSC3 357 aaKnown RBP14.21□□□□□ -0.13
HDAC8-214ENST00000439122 RAB11FIP4Q86YS3 637 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 HELBQ8NG08 1087 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-214ENST00000439122 USP28Q96RU2 1077 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 NUP98P52948 1817 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 AKAP11Q9UKA4 1901 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 PHKA1P46020 1223 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 ZNF512BQ96KM6 892 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-214ENST00000439122 PIH1D3Q9NQM4 214 aaKnown RBP14.21□□□□□ -0.13
HDAC8-214ENST00000439122 RCOR1Q9UKL0 485 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 COL14A1Q05707 1796 aaKnown RBP14.21□□□□□ -0.13
HDAC8-214ENST00000439122 ANKRD36CQ5JPF3 1778 aa14.21□□□□□ -0.13
HDAC8-214ENST00000439122 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 DHX16O60231 1041 aaKnown RBP14.2□□□□□ -0.14
HDAC8-214ENST00000439122 TRDNQ13061 729 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
HDAC8-214ENST00000439122 SPC24Q8NBT2 197 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 CPLX1O14810 134 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 ANTXR2P58335 489 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 PUM3Q15397 648 aaKnown RBP14.2□□□□□ -0.14
HDAC8-214ENST00000439122 ATL3Q6DD88 541 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 ZNF34Q8IZ26 560 aa14.2□□□□□ -0.14
HDAC8-214ENST00000439122 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 ME1P48163 572 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 OTUD7BQ6GQQ9 843 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-214ENST00000439122 LPIN2Q92539 896 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 HPS5Q9UPZ3 1129 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 MYH15Q9Y2K3 1946 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 UQCRFS1P1P0C7P4 283 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 UBE3CQ15386 1083 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 CCDC73Q6ZRK6 1079 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 PIBF1Q8WXW3 757 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 DNAJC25Q9H1X3 360 aa14.19□□□□□ -0.14
HDAC8-214ENST00000439122 MROH5Q6ZUA9 1318 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 PDE6AP16499 860 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-214ENST00000439122 ZNF165P49910 485 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 DNTTIP2Q5QJE6 756 aaKnown RBP14.18□□□□□ -0.14
HDAC8-214ENST00000439122 NBPF3Q9H094 633 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 GOLPH3LQ9H4A5 285 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 ORC3Q9UBD5 711 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-214ENST00000439122 WWC3Q9ULE0 1092 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 DENND2AQ9ULE3 1009 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
HDAC8-214ENST00000439122 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 TERF1P54274 439 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 SUSD4Q5VX71 490 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 TBC1D10CQ8IV04 446 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 AIDAQ96BJ3 306 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 MPHOSPH8Q99549 860 aa14.18□□□□□ -0.14
HDAC8-214ENST00000439122 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
HDAC8-214ENST00000439122 SNAP23O00161 211 aa14.17□□□□□ -0.14
HDAC8-214ENST00000439122 POLR3DP05423 398 aaPredicted RBP14.17□□□□□ -0.14
HDAC8-214ENST00000439122 ATP6V1AP38606 617 aa14.17□□□□□ -0.14
HDAC8-214ENST00000439122 EIF5P55010 431 aaKnown RBP14.17□□□□□ -0.14
HDAC8-214ENST00000439122 C17orf53Q8N3J3 647 aaPredicted RBP14.17□□□□□ -0.14
HDAC8-214ENST00000439122 ATRNO75882 1429 aa14.17□□□□□ -0.14
HDAC8-214ENST00000439122 KINO60870 393 aaKnown RBP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 SLC5A1P13866 664 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 SNW1Q13573 536 aaKnown RBP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 NOLC1Q14978 699 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 DDB1Q16531 1140 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 INTS5Q6P9B9 1019 aaKnown RBP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 SPATA5Q8NB90 893 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 FBXO18Q8NFZ0 1043 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 AK7Q96M32 723 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 CCDC87Q9NVE4 849 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 ANGEL1Q9UNK9 670 aaKnown RBP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 WDR19Q8NEZ3 1342 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms