RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NIF3L1Q9GZT8 377 aa6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 FAM177BA6PVY3 158 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 CPNE3O75131 537 aaKnown RBP6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 CDC25BP30305 580 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 KCNA1Q09470 495 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 DSC3Q14574 896 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 HGSNATQ68CP4 663 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 KIAA1211Q6ZU35 1233 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 TP53INP1Q96A56 240 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 CARD10Q9BWT7 1032 aa6.28□□□□□ -1.4
HMGB3P12-201ENST00000438745 EIF1AYO14602 144 aaKnown RBP6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 DDX3YO15523 660 aaKnown RBP6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 TMC7Q7Z402 723 aa6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 AGGF1Q8N302 714 aaeCLIP6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 UBL7Q96S82 380 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 DCTN4Q9UJW0 460 aa6.27□□□□□ -1.41
HMGB3P12-201ENST00000438745 A0A096LPE4 126 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 A0A1W2PPZ6 126 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 METTL12A8MUP2 240 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 GRIA4P48058 902 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 ARL4DP49703 201 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 C19orf57Q0VDD7 668 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 IKBKEQ14164 716 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 DUOXA2Q1HG44 320 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 CCDC74AQ96AQ1 378 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 CSRNP1Q96S65 589 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 LIN7BQ9HAP6 207 aa6.26□□□□□ -1.41
HMGB3P12-201ENST00000438745 PRSS36Q5K4E3 855 aa6.25□□□□□ -1.41
HMGB3P12-201ENST00000438745 PRR23CQ6ZRP0 262 aa6.25□□□□□ -1.41
HMGB3P12-201ENST00000438745 ASAP3Q8TDY4 903 aa6.25□□□□□ -1.41
HMGB3P12-201ENST00000438745 IVNS1ABPQ9Y6Y0 642 aa6.25□□□□□ -1.41
HMGB3P12-201ENST00000438745 TREHO43280 583 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 ITPKAP23677 461 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 PTPN12Q05209 780 aaKnown RBP6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 ZNF423Q2M1K9 1284 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 SPRED3Q2MJR0 410 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 ACAD11Q709F0 780 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 SLC51AQ86UW1 340 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 ARMC10Q8N2F6 343 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 GLIS3Q8NEA6 775 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 TMC1Q8TDI8 760 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 UBASH3BQ8TF42 649 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 FAM46AQ96IP4 442 aaKnown RBP6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 NRSN2Q9GZP1 204 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 NPHS2Q9NP85 383 aa6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P12-201ENST00000438745 PLCB3Q01970 1234 aa6.23□□□□□ -1.41
HMGB3P12-201ENST00000438745 PRPF40BQ6NWY9 871 aaKnown RBP6.23□□□□□ -1.41
HMGB3P12-201ENST00000438745 PSMG3-AS1Q96PY0 264 aa6.23□□□□□ -1.41
HMGB3P12-201ENST00000438745 CEP41Q9BYV8 373 aa6.23□□□□□ -1.41
HMGB3P12-201ENST00000438745 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 NLRP12P59046 1061 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 UVSSAQ2YD98 709 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 TMPRSS13Q9BYE2 586 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 RNF208Q9H0X6 261 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 EHD4Q9H223 541 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
HMGB3P12-201ENST00000438745 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 PATL2C9JE40 543 aaKnown RBP6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 DLGAP3O95886 979 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 GLB1P16278 677 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 PCDH1Q08174 1060 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 ENOX2Q16206 610 aaKnown RBP6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 EXOSC6Q5RKV6 272 aaKnown RBP6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 EPS8L3Q8TE67 593 aaKnown RBP6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 ASB16Q96NS5 453 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 ZNF576Q9H609 170 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 SUGCTQ9HAC7 445 aa6.21□□□□□ -1.42
HMGB3P12-201ENST00000438745 LOC100289279A0A1B0GTE1 492 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 B3GALT4O96024 378 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 MAPK1P28482 360 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 GRM2Q14416 872 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 RPS26P11Q5JNZ5 115 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 ANKRD34AQ69YU3 496 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 SMG8Q8ND04 991 aaKnown RBP6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 RUSC1Q9BVN2 902 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 RAXQ9Y2V3 346 aa6.2□□□□□ -1.42
HMGB3P12-201ENST00000438745 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
HMGB3P12-201ENST00000438745 GSTM4Q03013 218 aa6.19□□□□□ -1.42
HMGB3P12-201ENST00000438745 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
HMGB3P12-201ENST00000438745 MYRFLQ96LU7 910 aa6.19□□□□□ -1.42
HMGB3P12-201ENST00000438745 TRAK1Q9UPV9 953 aa6.19□□□□□ -1.42
HMGB3P12-201ENST00000438745 DHX15O43143 795 aaKnown RBP6.18□□□□□ -1.42
HMGB3P12-201ENST00000438745 TIAF1O95411 115 aa6.18□□□□□ -1.42
HMGB3P12-201ENST00000438745 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P12-201ENST00000438745 ZSCAN29Q8IWY8 852 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P12-201ENST00000438745 TRIM56Q9BRZ2 755 aaKnown RBP6.18□□□□□ -1.42
HMGB3P12-201ENST00000438745 ZFYVE1Q9HBF4 777 aa6.18□□□□□ -1.42
HMGB3P12-201ENST00000438745 GADD45BO75293 160 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 CYP11A1P05108 521 aa6.17□□□□□ -1.42
HMGB3P12-201ENST00000438745 CTSBP07858 339 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms