RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 DENND2AQ9ULE3 1009 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
HLA-DMB-259ENST00000438510 ERC2O15083 957 aa12.9□□□□□ -0.34
HLA-DMB-259ENST00000438510 EIF6P56537 245 aaKnown RBP12.9□□□□□ -0.34
HLA-DMB-259ENST00000438510 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
HLA-DMB-259ENST00000438510 TDRD7Q8NHU6 1098 aaKnown RBP12.9□□□□□ -0.34
HLA-DMB-259ENST00000438510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-DMB-259ENST00000438510 AOX1Q06278 1338 aa12.89□□□□□ -0.35
HLA-DMB-259ENST00000438510 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
HLA-DMB-259ENST00000438510 ATP5JP18859 108 aa12.89□□□□□ -0.35
HLA-DMB-259ENST00000438510 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
HLA-DMB-259ENST00000438510 COL1A1P02452 1464 aaPredicted RBP12.89□□□□□ -0.35
HLA-DMB-259ENST00000438510 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 USP17L3A6NCW0 530 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 USP17L4A6NCW7 530 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 FZD9O00144 591 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 RASGRF1Q13972 1273 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 TNIP1Q15025 636 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 USP17L1Q7RTZ2 530 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 ZGPATQ8N5A5 531 aaKnown RBP12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 SPATA5Q8NB90 893 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
HLA-DMB-259ENST00000438510 YDJCA8MPS7 323 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 PDE4AP27815 886 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 MCAMP43121 646 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 PDE1AP54750 535 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 GTF2IP78347 998 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 CHAF1AQ13111 956 aaPredicted RBP12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 PLEKHM2Q8IWE5 1019 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 OSBPL3Q9H4L5 887 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 SCN4AP35499 1836 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 UTRNP46939 3433 aa12.87□□□□□ -0.35
HLA-DMB-259ENST00000438510 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
HLA-DMB-259ENST00000438510 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
HLA-DMB-259ENST00000438510 RAD17O75943 681 aa12.86□□□□□ -0.35
HLA-DMB-259ENST00000438510 FKBP1AP62942 108 aaKnown RBP12.86□□□□□ -0.35
HLA-DMB-259ENST00000438510 HMG20BQ9P0W2 317 aa12.86□□□□□ -0.35
HLA-DMB-259ENST00000438510 SALL1Q9NSC2 1324 aa12.86□□□□□ -0.35
HLA-DMB-259ENST00000438510 CXCL9Q07325 125 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 SCARF1Q14162 830 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 TTF1Q15361 905 aaPredicted RBP12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 MFSD14BQ5SR56 506 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 GPC2Q8N158 579 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 PI4K2BQ8TCG2 481 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 DNAJC2Q99543 621 aaKnown RBP12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 HAUS7Q99871 368 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
HLA-DMB-259ENST00000438510 PSMD14O00487 310 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 IGSF3O75054 1194 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 RPS12P25398 132 aaKnown RBP12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 ZAP70P43403 619 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 SPTY2D1Q68D10 685 aaPredicted RBP12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 PI16Q6UXB8 463 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 KCNQ5Q9NR82 932 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 MAST3O60307 1309 aa12.84□□□□□ -0.35
HLA-DMB-259ENST00000438510 GOLIM4O00461 696 aa12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 RGS3P49796 1198 aa12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 AGBL3Q8NEM8 1001 aa12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 ABCF2Q9UG63 623 aa12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 GJA3Q9Y6H8 435 aa12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 ADAMTSL1Q8N6G6 1762 aa12.83□□□□□ -0.36
HLA-DMB-259ENST00000438510 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 LDHBP07195 334 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 MMP14P50281 582 aa12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 TTC22Q5TAA0 569 aa12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 LRP2BPQ9P2M1 347 aa12.82□□□□□ -0.36
HLA-DMB-259ENST00000438510 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 TMED8Q6PL24 325 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms