RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 WDHD1O75717 1129 aaPredicted RBP11.18□□□□□ -0.62
SCRN1-208ENST00000438497 MTMR14Q8NCE2 650 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 TTLL11Q8NHH1 800 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 OPTNQ96CV9 577 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 ELP3Q9H9T3 547 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 NR2E3Q9Y5X4 410 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 ZNF804BA4D1E1 1349 aa11.17□□□□□ -0.62
SCRN1-208ENST00000438497 CLRN2A0PK11 232 aa11.17□□□□□ -0.62
SCRN1-208ENST00000438497 DUSP27Q5VZP5 1158 aa11.17□□□□□ -0.62
SCRN1-208ENST00000438497 PRMT6Q96LA8 375 aaPredicted RBP11.17□□□□□ -0.62
SCRN1-208ENST00000438497 HTATIP2Q9BUP3 242 aa11.17□□□□□ -0.62
SCRN1-208ENST00000438497 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
SCRN1-208ENST00000438497 COL1A1P02452 1464 aaPredicted RBP11.17□□□□□ -0.62
SCRN1-208ENST00000438497 HTTP42858 3142 aa11.17□□□□□ -0.62
SCRN1-208ENST00000438497 CCL15-CCL14A0A0B4J2E2 113 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 F8W031 263 aaPredicted RBP11.16□□□□□ -0.62
SCRN1-208ENST00000438497 IGHMBP2P38935 993 aaKnown RBP11.16□□□□□ -0.62
SCRN1-208ENST00000438497 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
SCRN1-208ENST00000438497 GTF2A2P52657 109 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 RBM5P52756 815 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCRN1-208ENST00000438497 RASA3Q14644 834 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 CCL15Q16663 113 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 CFAP100Q494V2 611 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 METTL22Q9BUU2 404 aaPredicted RBP11.16□□□□□ -0.62
SCRN1-208ENST00000438497 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 GREM2Q9H772 168 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
SCRN1-208ENST00000438497 GNRH1P01148 92 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 PRMT2P55345 433 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 CTSWP56202 376 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 MTFR1Q15390 333 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 CERS5Q8N5B7 392 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 ARHGAP39Q9C0H5 1083 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 PRO3102Q9H379 93 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 LAMB1P07942 1786 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 SSC5DA1L4H1 1573 aa11.15□□□□□ -0.62
SCRN1-208ENST00000438497 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-208ENST00000438497 SPDYE2BA6NHP3 402 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 ELL2O00472 640 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-208ENST00000438497 TLR2O60603 784 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-208ENST00000438497 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
SCRN1-208ENST00000438497 SPDYE6P0CI01 402 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 KLRK1P26718 216 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 KCNJ4P48050 445 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 LACTBP83111 547 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-208ENST00000438497 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.14□□□□□ -0.63
SCRN1-208ENST00000438497 FAM43AQ8N2R8 423 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
SCRN1-208ENST00000438497 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
SCRN1-208ENST00000438497 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
SCRN1-208ENST00000438497 SHISA4Q96DD7 197 aa11.13□□□□□ -0.63
SCRN1-208ENST00000438497 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
SCRN1-208ENST00000438497 BRCA2P51587 3418 aa11.13□□□□□ -0.63
SCRN1-208ENST00000438497 A0A1W2PPC1 479 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 GJB1P08034 283 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 CETPP11597 493 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 HOXD10P28358 340 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 GJA8P48165 433 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 TNFAIP1Q13829 316 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 CSADQ9Y600 493 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
SCRN1-208ENST00000438497 AOX1Q06278 1338 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 SOX1O00570 391 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-208ENST00000438497 CCL5P13501 91 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 GRK4P32298 578 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 PSMC4P43686 418 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 FKBP1AP62942 108 aaKnown RBP11.11□□□□□ -0.63
SCRN1-208ENST00000438497 CHRNDQ07001 517 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-208ENST00000438497 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 TDRD3Q9H7E2 651 aaKnown RBP11.11□□□□□ -0.63
SCRN1-208ENST00000438497 ZNF70Q9UC06 446 aaPredicted RBP11.11□□□□□ -0.63
SCRN1-208ENST00000438497 STAP2Q9UGK3 403 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 SRRDQ9UH36 339 aa11.11□□□□□ -0.63
SCRN1-208ENST00000438497 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 H7C1W4 665 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 SNAP23O00161 211 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 EVI5O60447 810 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 TAF5LO75529 589 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
SCRN1-208ENST00000438497 IGKV5-2P06315 115 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 IL1R1P14778 569 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 ITGA6P23229 1130 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 UBXN2AP68543 259 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 NEXNQ0ZGT2 675 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 VGLL4Q14135 290 aa11.1□□□□□ -0.63
SCRN1-208ENST00000438497 KSR2Q6VAB6 950 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms