RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-205ENST00000438362 CNNM2Q9H8M5 875 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 SLC52A2Q9HAB3 445 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 LUC7LQ9NQ29 371 aaKnown RBP7.67□□□□□ -1.18
CSDE1-205ENST00000438362 MRVI1Q9Y6F6 885 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 NRXN1Q9ULB1 1477 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 TAF5LO75529 589 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 SOGA3Q5TF21 947 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 USP28Q96RU2 1077 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 DSCC1Q9BVC3 393 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 IMPACTQ9P2X3 320 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 YEATS4O95619 227 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 SKIDA1Q1XH10 827 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 ZNF202O95125 648 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 CDR1P51861 262 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 NLRP5P59047 1200 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 NECTIN1Q15223 517 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 PROSER3Q2NL68 480 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 CAVIN4Q5BKX8 364 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 TXLNBQ8N3L3 684 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 CRACR2AQ9BSW2 395 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 UTP14AQ9BVJ6 771 aaKnown RBP7.67□□□□□ -1.18
CSDE1-205ENST00000438362 ALKQ9UM73 1620 aa7.67□□□□□ -1.18
CSDE1-205ENST00000438362 E7EWF7 191 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 N4BP3O15049 544 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 PFKFB2O60825 505 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 RXRAP19793 462 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 MAP9Q49MG5 647 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 TDRD7Q8NHU6 1098 aaKnown RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 APPBP2Q92624 585 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 MRFAP1L1Q96HT8 127 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 SEC62Q99442 399 aaKnown RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 INO80Q9ULG1 1556 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 NLRP1Q9C000 1473 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 KIF20AO95235 890 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 BMP15O95972 392 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 AFMP43652 599 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 FANCCQ00597 558 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 ORAI2Q96SN7 254 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 COPRSQ9NQ92 184 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 REREQ9P2R6 1566 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 ARHGEF40Q8TER5 1519 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 H0YHG0 523 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 FAM193AP78312 1265 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 ADALQ6DHV7 355 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 CADPS2Q86UW7 1296 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 KRI1Q8N9T8 703 aaKnown RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC191Q8NCU4 936 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 ZNF274Q96GC6 653 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 CTAGE1Q96RT6 745 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 PYM1Q9BRP8 204 aaKnown RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
CSDE1-205ENST00000438362 TLR7Q9NYK1 1049 aaKnown RBP7.66□□□□□ -1.18
CSDE1-205ENST00000438362 ABCA9Q8IUA7 1624 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 TRIM75PA6NK02 468 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC175P0C221 793 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 PDE4CQ08493 712 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 CABLES1Q8TDN4 633 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 ZNF594Q96JF6 807 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-205ENST00000438362 TIGD1Q96MW7 591 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 HAUS7Q99871 368 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 ANGEL1Q9UNK9 670 aaKnown RBP7.65□□□□□ -1.18
CSDE1-205ENST00000438362 PLEKHG1Q9ULL1 1385 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 ATP10DQ9P241 1426 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 A2ML1A8K2U0 1454 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 PTPRMP28827 1452 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 CCDC194A0A1B0GVG4 234 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 MCM3P25205 808 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 NLRP12P59046 1061 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 SPA17Q15506 151 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 ELF2Q15723 593 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 TTC14Q96N46 770 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 TRERF1Q96PN7 1200 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 KIAA1468Q9P260 1216 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 DBNLQ9UJU6 430 aaKnown RBP7.65□□□□□ -1.18
CSDE1-205ENST00000438362 ADGRB1O14514 1584 aa7.65□□□□□ -1.18
CSDE1-205ENST00000438362 GPAA1O43292 621 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 SPAG1Q07617 926 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 MYSM1Q5VVJ2 828 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 ZNF589Q86UQ0 364 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-205ENST00000438362 LRRC8AQ8IWT6 810 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 ESR2Q92731 530 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 NRBP1Q9UHY1 535 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 SLC4A4Q9Y6R1 1079 aa7.65□□□□□ -1.19
CSDE1-205ENST00000438362 KRT18P05783 430 aaKnown RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 CYP21A2P08686 494 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 GABPB1Q06547 395 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 FKBP15Q5T1M5 1219 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 NUTM2AQ8IVF1 878 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 DHX58Q96C10 678 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 BAG1Q99933 345 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 XPO4Q9C0E2 1151 aaKnown RBP7.64□□□□□ -1.19
CSDE1-205ENST00000438362 TSPYL1Q9H0U9 437 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 LMAN1P49257 510 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 SCRN1Q12765 414 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 GOLGA1Q92805 767 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 TMEM87BQ96K49 555 aa7.64□□□□□ -1.19
CSDE1-205ENST00000438362 C19orf44Q9H6X5 657 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms