RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 USP50Q70EL3 339 aaPredicted RBP10.76□□□□□ -0.69
HERPUD2-206ENST00000438224 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
HERPUD2-206ENST00000438224 CNTROBQ8N137 903 aa10.76□□□□□ -0.69
HERPUD2-206ENST00000438224 GMLQ99445 158 aa10.76□□□□□ -0.69
HERPUD2-206ENST00000438224 MXD3Q9BW11 206 aa10.76□□□□□ -0.69
HERPUD2-206ENST00000438224 LEMD3Q9Y2U8 911 aa10.76□□□□□ -0.69
HERPUD2-206ENST00000438224 TRAF5O00463 557 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 GABBR2O75899 941 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 TRIM27P14373 513 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 RFX5P48382 616 aaPredicted RBP10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 MFSD10Q14728 455 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 CCDC57Q2TAC2 916 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 LRRC24Q50LG9 513 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 DLK2Q6UY11 383 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 KLHDC4Q8TBB5 520 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 DPF2Q92785 391 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 KLRG1Q96E93 195 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 MEIS3Q99687 375 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 API5Q9BZZ5 524 aaKnown RBP10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 ANKRD2Q9GZV1 360 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 PGAP2Q9UHJ9 254 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 ASTN2O75129 1339 aaPredicted RBP10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 KIF16BQ96L93 1317 aa10.75□□□□□ -0.69
HERPUD2-206ENST00000438224 PDE4AP27815 886 aa10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 DACT2Q5SW24 774 aa10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 RSBN1LQ6PCB5 846 aaPredicted RBP10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 LDHAL6AQ6ZMR3 332 aa10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 RIPOR2Q9Y4F9 1068 aa10.74□□□□□ -0.69
HERPUD2-206ENST00000438224 USP17L3A6NCW0 530 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 USP17L4A6NCW7 530 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 G3V3G9 751 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 PLIN1O60240 522 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 RPS12P25398 132 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 PDE4DQ08499 809 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 TAF7LQ5H9L4 462 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 INTS3Q68E01 1043 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 USP17L1Q7RTZ2 530 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 VGLL2Q8N8G2 317 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 ARHGAP45Q92619 1136 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 COA1Q9GZY4 146 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 C1orf115Q9H7X2 142 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 CD209Q9NNX6 404 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 CNNM1Q9NRU3 951 aa10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-206ENST00000438224 H7C1D1 291 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 TRIM66O15016 1216 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 UBTFL1P0CB47 393 aaPredicted RBP10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 KCNJ4P48050 445 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 ZNF280AP59817 542 aaPredicted RBP10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 CST9Q5W186 159 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 CERS5Q8N5B7 392 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 JMYQ8N9B5 988 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 AGBL3Q8NEM8 1001 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 THSD7BQ9C0I4 1608 aa10.72□□□□□ -0.69
HERPUD2-206ENST00000438224 TMEM88BA6NKF7 163 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 GTF2IP78347 998 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 CNTNAP1P78357 1384 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 PTPN12Q05209 780 aaKnown RBP10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 KIF4BQ2VIQ3 1234 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 STRIP1Q5VSL9 837 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 ATF7IPQ6VMQ6 1270 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 ATG9AQ7Z3C6 839 aa10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 FRAT1Q92837 279 aaPredicted RBP10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 MKRN1Q9UHC7 482 aaKnown RBP10.71□□□□□ -0.69
HERPUD2-206ENST00000438224 RLBP1P12271 317 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 IL1R1P14778 569 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 GYG1P46976 350 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 UBE4AQ14139 1066 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 TTLL5Q6EMB2 1281 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
HERPUD2-206ENST00000438224 AOX1Q06278 1338 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 MROH5Q6ZUA9 1318 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 ADM5C9JUS6 153 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 EYA2O00167 538 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 USP48Q86UV5 1035 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 TMEM57Q8N5G2 664 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 DDX27Q96GQ7 796 aaKnown RBP10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 MYOZ2Q9NPC6 264 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 SCAF8Q9UPN6 1271 aaKnown RBP10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
HERPUD2-206ENST00000438224 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 RASSF10A6NK89 507 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 PDE8BO95263 885 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 FGFR2P21802 821 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms