RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 NAT10Q9H0A0 1025 aaKnown RBP22.54■■□□□ 1.2
FAM239A-202ENST00000438107 NAP1L2Q9ULW6 460 aaPredicted RBP22.54■■□□□ 1.2
FAM239A-202ENST00000438107 TNNT1P13805 278 aa22.53■■□□□ 1.2
FAM239A-202ENST00000438107 ZCRB1Q8TBF4 217 aaKnown RBP22.53■■□□□ 1.2
FAM239A-202ENST00000438107 XIRP1Q702N8 1843 aaKnown RBP22.53■■□□□ 1.2
FAM239A-202ENST00000438107 A1BGP04217 495 aa22.53■■□□□ 1.2
FAM239A-202ENST00000438107 NKX1-1Q15270 411 aaPredicted RBP22.53■■□□□ 1.2
FAM239A-202ENST00000438107 C16orf45Q96MC5 204 aaPredicted RBP22.53■■□□□ 1.2
FAM239A-202ENST00000438107 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
FAM239A-202ENST00000438107 ZBTB3Q9H5J0 574 aa22.53■■□□□ 1.2
FAM239A-202ENST00000438107 PCDHA7Q9UN72 937 aa22.53■■□□□ 1.2
FAM239A-202ENST00000438107 TNS2Q63HR2 1409 aa22.53■■□□□ 1.2
FAM239A-202ENST00000438107 WDR19Q8NEZ3 1342 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 YEATS4O95619 227 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 TTC39AQ5SRH9 613 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 TTLL5Q6EMB2 1281 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 PDCL2Q8N4E4 241 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 PUS3Q9BZE2 481 aaKnown RBP22.52■■□□□ 1.2
FAM239A-202ENST00000438107 GUCY1B3Q02153 619 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 CCDC57Q2TAC2 916 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 CHST3Q7LGC8 479 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 KCNG4Q8TDN1 519 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 POLR3EQ9NVU0 708 aa22.52■■□□□ 1.2
FAM239A-202ENST00000438107 TPD52L1Q16890 204 aaPredicted RBP22.51■■□□□ 1.19
FAM239A-202ENST00000438107 BRAPQ7Z569 592 aa22.51■■□□□ 1.19
FAM239A-202ENST00000438107 LINC00301Q8NCQ3 95 aa22.51■■□□□ 1.19
FAM239A-202ENST00000438107 C4AP0C0L4 1744 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 C4BP0C0L5 1744 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 FAM177BA6PVY3 158 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 FKBP4Q02790 459 aaKnown RBP eCLIP22.5■■□□□ 1.19
FAM239A-202ENST00000438107 MB21D2Q8IYB1 491 aaPredicted RBP22.5■■□□□ 1.19
FAM239A-202ENST00000438107 APPBP2Q92624 585 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 WDR17Q8IZU2 1322 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 KDM4FA0A1W2PPD8 638 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 FOXP2O15409 715 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 XAGE2Q96GT9 111 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 C8orf76Q96K31 380 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 BPIFA3Q9BQP9 254 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
FAM239A-202ENST00000438107 TRIM28Q13263 835 aaKnown RBP22.49■■□□□ 1.19
FAM239A-202ENST00000438107 PPP4R3BQ5MIZ7 849 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 GORABQ5T7V8 394 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 BRINP3Q76B58 766 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 FBXO18Q8NFZ0 1043 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 ARID3AQ99856 593 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 PLA2G12BQ9BX93 195 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 KCND1Q9NSA2 647 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 STRCQ7RTU9 1775 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 PRC1O43663 620 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 TCIRG1Q13488 830 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 NCOA7Q8NI08 942 aa22.49■■□□□ 1.19
FAM239A-202ENST00000438107 FGAP02671 866 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 STK38Q15208 465 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 WASHC4Q2M389 1173 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 GSDMDP57764 484 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 PKNOX2Q96KN3 472 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 SDF4Q9BRK5 362 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 HPS5Q9UPZ3 1129 aa22.48■■□□□ 1.19
FAM239A-202ENST00000438107 KLF18A0A0U1RQI7 1052 aa22.47■■□□□ 1.19
FAM239A-202ENST00000438107 SF3A1Q15459 793 aaKnown RBP22.47■■□□□ 1.19
FAM239A-202ENST00000438107 AOPEPQ8N6M6 819 aa22.47■■□□□ 1.19
FAM239A-202ENST00000438107 KIAA1468Q9P260 1216 aa22.47■■□□□ 1.19
FAM239A-202ENST00000438107 IMPACTQ9P2X3 320 aa22.47■■□□□ 1.19
FAM239A-202ENST00000438107 ORC3Q9UBD5 711 aaPredicted RBP22.47■■□□□ 1.19
FAM239A-202ENST00000438107 ADORA1P30542 326 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 MYSM1Q5VVJ2 828 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 CCDC112Q8NEF3 446 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 GOLGA8BA8MQT2 603 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 SPTLC2O15270 562 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 PCCAP05165 728 aaPredicted RBP22.46■■□□□ 1.19
FAM239A-202ENST00000438107 NCBP1Q09161 790 aaKnown RBP22.46■■□□□ 1.19
FAM239A-202ENST00000438107 CEP135Q66GS9 1140 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 RALYLQ86SE5 291 aaKnown RBP22.46■■□□□ 1.19
FAM239A-202ENST00000438107 CLIC4Q9Y696 253 aa22.46■■□□□ 1.19
FAM239A-202ENST00000438107 A0A1B0GVL5 298 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 CCDC69A6NI79 296 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 CSF1RP07333 972 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 SKILP12757 684 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 NDUFA8P51970 172 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 CCZ1BP86790 482 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 CCZ1P86791 482 aaPredicted RBP22.45■■□□□ 1.18
FAM239A-202ENST00000438107 OSBPL5Q9H0X9 879 aaPredicted RBP22.45■■□□□ 1.18
FAM239A-202ENST00000438107 GPHNQ9NQX3 736 aaPredicted RBP22.45■■□□□ 1.18
FAM239A-202ENST00000438107 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
FAM239A-202ENST00000438107 AKAP11Q9UKA4 1901 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 ANTXR2P58335 489 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 HAND2P61296 217 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 DHX8Q14562 1220 aaKnown RBP22.45■■□□□ 1.18
FAM239A-202ENST00000438107 NYAP1Q6ZVC0 841 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 TOM1L2Q6ZVM7 507 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 PRDM11Q9NQV5 511 aa22.45■■□□□ 1.18
FAM239A-202ENST00000438107 ZNF213O14771 459 aa22.44■■□□□ 1.18
FAM239A-202ENST00000438107 CPLX1O14810 134 aa22.44■■□□□ 1.18
FAM239A-202ENST00000438107 PPFIA3O75145 1194 aa22.44■■□□□ 1.18
FAM239A-202ENST00000438107 ZRSR1Q15695 479 aaKnown RBP22.44■■□□□ 1.18
FAM239A-202ENST00000438107 ZAP70P43403 619 aa22.43■■□□□ 1.18
FAM239A-202ENST00000438107 SYNE3Q6ZMZ3 975 aa22.43■■□□□ 1.18
FAM239A-202ENST00000438107 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.43■■□□□ 1.18
FAM239A-202ENST00000438107 PUS7LQ9H0K6 701 aaKnown RBP22.43■■□□□ 1.18
FAM239A-202ENST00000438107 NEDD4P46934 1319 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms