RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 CCDC151A5D8V7 595 aa15.28■□□□□ 0.04
KDM4C-206ENST00000438023 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
KDM4C-206ENST00000438023 KIF5AQ12840 1032 aa15.28■□□□□ 0.04
KDM4C-206ENST00000438023 FYB1O15117 783 aa15.27■□□□□ 0.04
KDM4C-206ENST00000438023 RNF40O75150 1001 aa15.27■□□□□ 0.04
KDM4C-206ENST00000438023 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
KDM4C-206ENST00000438023 IRAK4Q9NWZ3 460 aa15.27■□□□□ 0.04
KDM4C-206ENST00000438023 NSD2O96028 1365 aa15.27■□□□□ 0.04
KDM4C-206ENST00000438023 TACC1O75410 805 aa15.27■□□□□ 0.04
KDM4C-206ENST00000438023 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.04
KDM4C-206ENST00000438023 MTIF2P46199 727 aaKnown RBP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 SNCBQ16143 134 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 Q6ZUG5 572 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 TDRD7Q8NHU6 1098 aaKnown RBP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 SAMD15Q9P1V8 674 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 PPP2R2CQ9Y2T4 447 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 A6NNZ2 444 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 HMGB1P09429 215 aaKnown RBP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 IFT88Q13099 833 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 WHAMMP3Q1A5X7 153 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 TUBB8Q3ZCM7 444 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 CCDC170Q8IYT3 715 aa15.27■□□□□ 0.03
KDM4C-206ENST00000438023 NSRP1Q9H0G5 558 aaKnown RBP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 SEPT11Q9NVA2 429 aaKnown RBP15.27■□□□□ 0.03
KDM4C-206ENST00000438023 VIMP08670 466 aaKnown RBP15.26■□□□□ 0.03
KDM4C-206ENST00000438023 CLTAP09496 248 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 NUTM2GQ5VZR2 741 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 RPUSD2Q8IZ73 545 aaKnown RBP15.26■□□□□ 0.03
KDM4C-206ENST00000438023 IGSF22Q8N9C0 903 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.26■□□□□ 0.03
KDM4C-206ENST00000438023 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 CROCC2H7BZ55 1655 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 AK9Q5TCS8 1911 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 TAF7Q15545 349 aaPredicted RBP15.26■□□□□ 0.03
KDM4C-206ENST00000438023 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 PHACTR3Q96KR7 559 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 ZHX3Q9H4I2 956 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 GSTTP1A0A1W2PQM5 241 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 USP27XA6NNY8 438 aa15.26■□□□□ 0.03
KDM4C-206ENST00000438023 NOS1P29475 1434 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 MACROD2A1Z1Q3 448 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
KDM4C-206ENST00000438023 DUOX2Q9NRD8 1548 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 IDEP14735 1019 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 CEP131Q9UPN4 1083 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 RUFY3Q7L099 469 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 CCDC144CPQ8IYA2 1237 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 PSMB7Q99436 277 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 SERPINA10Q9UK55 444 aa15.25■□□□□ 0.03
KDM4C-206ENST00000438023 TPX2Q9ULW0 747 aaKnown RBP15.25■□□□□ 0.03
KDM4C-206ENST00000438023 SLC8A1P32418 973 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 HDGFP51858 240 aaKnown RBP15.24■□□□□ 0.03
KDM4C-206ENST00000438023 APOBRQ0VD83 1088 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 FLIIQ13045 1269 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 LAMC1P11047 1609 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 CHUKO15111 745 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 HAND2P61296 217 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 FAM169AQ9Y6X4 670 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 ACTN3Q08043 901 aaPredicted RBP15.24■□□□□ 0.03
KDM4C-206ENST00000438023 ZKSCAN8Q15776 578 aaPredicted RBP15.24■□□□□ 0.03
KDM4C-206ENST00000438023 WWC2Q6AWC2 1192 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
KDM4C-206ENST00000438023 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
KDM4C-206ENST00000438023 NUTM2AQ8IVF1 878 aaPredicted RBP15.24■□□□□ 0.03
KDM4C-206ENST00000438023 PTPRCP08575 1304 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 CTIFO43310 598 aaKnown RBP15.23■□□□□ 0.03
KDM4C-206ENST00000438023 KRT83P78385 493 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 SATB1Q01826 763 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 GOLGA8FQ08AF8 430 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 GOLGA8DPQ0D2H9 430 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 TUBB2AQ13885 445 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 PTPN21Q16825 1174 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 KCTD16Q68DU8 428 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 CNGA4Q8IV77 575 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 TUBB2BQ9BVA1 445 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 MRFAP1Q9Y605 127 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 ABCC4O15439 1325 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 SMIM24O75264 130 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 KCNF1Q9H3M0 494 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
KDM4C-206ENST00000438023 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
KDM4C-206ENST00000438023 ATP11AP98196 1134 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
KDM4C-206ENST00000438023 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
KDM4C-206ENST00000438023 MXRA7P84157 204 aa15.22■□□□□ 0.03
KDM4C-206ENST00000438023 CCDC38Q502W7 563 aa15.22■□□□□ 0.03
KDM4C-206ENST00000438023 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
KDM4C-206ENST00000438023 PIK3R5Q8WYR1 880 aa15.22■□□□□ 0.03
KDM4C-206ENST00000438023 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms