RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 EFCAB13Q8IY85 973 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 F13A1P00488 732 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 KRT23Q9C075 422 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 ERCC5P28715 1186 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-209ENST00000437951 ZKSCAN8Q15776 578 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-209ENST00000437951 TTC22Q5TAA0 569 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-209ENST00000437951 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 GOLGA8QA0A0J9YX86 632 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 GOLGA8OA6NCC3 632 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 GOLGA8NF8WBI6 632 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-209ENST00000437951 RNF8O76064 485 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
PTCH1-209ENST00000437951 CCDC122Q5T0U0 273 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 BRAPQ7Z569 592 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 IL1RAPL2Q9NP60 686 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 OPHN1O60890 802 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 PPP1R9AQ9ULJ8 1098 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 PTGS1P23219 599 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
PTCH1-209ENST00000437951 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.94□□□□□ -0.34
PTCH1-209ENST00000437951 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 OAS2P29728 719 aaKnown RBP12.93□□□□□ -0.34
PTCH1-209ENST00000437951 NLRP6P59044 892 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 ITIH3Q06033 890 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 KIFAP3Q92845 792 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 SATB2Q9UPW6 733 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
PTCH1-209ENST00000437951 SYCE1Q8N0S2 351 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 SH3BP5O60239 455 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 SMIM24O75264 130 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 P3H4Q92791 437 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 TMX3Q96JJ7 454 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 HECW1Q76N89 1606 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 SLC5A1P13866 664 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 TFIP11Q9UBB9 837 aaKnown RBP12.93□□□□□ -0.34
PTCH1-209ENST00000437951 CEP104O60308 925 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 TROVE2P10155 538 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTCH1-209ENST00000437951 RARSP54136 660 aaKnown RBP12.93□□□□□ -0.34
PTCH1-209ENST00000437951 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
PTCH1-209ENST00000437951 CFAP65Q6ZU64 1925 aaKnown RBP12.93□□□□□ -0.34
PTCH1-209ENST00000437951 APBA1Q02410 837 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 DNAJC25Q9H1X3 360 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
PTCH1-209ENST00000437951 GNAQP50148 359 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 HDAC1Q13547 482 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-209ENST00000437951 SLMAPQ14BN4 828 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 ANKRD20A3Q5VUR7 823 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 RSPH3Q86UC2 560 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-209ENST00000437951 CCDC68Q9H2F9 335 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 TXNDC9O14530 226 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 KLHL14Q9P2G3 628 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 E7EVH7 732 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 INPP1P49441 399 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 RAB17Q9H0T7 212 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 CAPN7Q9Y6W3 813 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 GIPC1O14908 333 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
PTCH1-209ENST00000437951 DENND2CQ68D51 928 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 BAIAP2L1Q9UHR4 511 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
PTCH1-209ENST00000437951 SMIM23A6NLE4 172 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 DMTNQ08495 405 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 PSMD1Q99460 953 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 DACT1Q9NYF0 836 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
PTCH1-209ENST00000437951 KAT14Q9H8E8 782 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms