RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 CCDC93Q567U6 631 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 MYSM1Q5VVJ2 828 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 E4F1Q66K89 784 aaPredicted RBP4.99□□□□□ -1.61
HLA-N-201ENST00000437516 ATG9AQ7Z3C6 839 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 UBE3BQ7Z3V4 1068 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 KRT28Q7Z3Y7 464 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 TMC6Q7Z403 805 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 FCHSD1Q86WN1 690 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 ANKLE2Q86XL3 938 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 TTC5Q8N0Z6 440 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 ZNF496Q96IT1 587 aaPredicted RBP4.99□□□□□ -1.61
HLA-N-201ENST00000437516 C8orf76Q96K31 380 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 PPP1R13BQ96KQ4 1090 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 NEUROD6Q96NK8 337 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 FMNL2Q96PY5 1086 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 FTOQ9C0B1 505 aaKnown RBP eCLIP4.99□□□□□ -1.61
HLA-N-201ENST00000437516 XPO4Q9C0E2 1151 aaKnown RBP4.99□□□□□ -1.61
HLA-N-201ENST00000437516 ATG3Q9NT62 314 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 POLR3EQ9NVU0 708 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 IFNKQ9P0W0 207 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 CLIC4Q9Y696 253 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 NDUFB9Q9Y6M9 179 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 CARMIL3Q8ND23 1372 aa4.99□□□□□ -1.61
HLA-N-201ENST00000437516 SIPA1L3O60292 1781 aaPredicted RBP4.99□□□□□ -1.61
HLA-N-201ENST00000437516 MAST3O60307 1309 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 PHLPP2Q6ZVD8 1323 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 WDR19Q8NEZ3 1342 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 KDM6AO15550 1401 aaPredicted RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 MST1RQ04912 1400 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 FAM237AA0A1B0GTK4 181 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 CCDC66A2RUB6 948 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ATP5J2-PTCD1G3V325 749 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 M0R2C6 588 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 EYA2O00167 538 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ATP8B1O43520 1251 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 PRC1O43663 620 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 PTCD1O75127 700 aaKnown RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 PPP6R2O75170 966 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ZNF202O95125 648 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 SMC2O95347 1197 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 TPM1P09493 284 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 H2AFXP16104 143 aaPredicted RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 SFPQP23246 707 aaKnown RBP eCLIP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 CMA1P23946 247 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 TIMM10P62072 90 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 FANCCQ00597 558 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 NCAPHQ15003 741 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ELF2Q15723 593 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 IMMTQ16891 758 aaKnown RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ANO1Q5XXA6 986 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ARMCX5Q6P1M9 558 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 FBXO38Q6PIJ6 1188 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 SYT10Q6XYQ8 523 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 SYNE3Q6ZMZ3 975 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ELOA2Q8IYF1 753 aaPredicted RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 NFATC2IPQ8NCF5 419 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 FBXO18Q8NFZ0 1043 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 NCOA7Q8NI08 942 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 DCAF5Q96JK2 942 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ORAI2Q96SN7 254 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 SRRTQ9BXP5 876 aaKnown RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 NCOA5Q9HCD5 579 aaKnown RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ORC3Q9UBD5 711 aaPredicted RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 TUBE1Q9UJT0 475 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 FBXO3Q9UK99 471 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 NAP1L2Q9ULW6 460 aaPredicted RBP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 AXIN2Q9Y2T1 843 aa4.98□□□□□ -1.61
HLA-N-201ENST00000437516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.98□□□□□ -1.61
HLA-N-201ENST00000437516 ERBB3P21860 1342 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 KIF13AQ9H1H9 1805 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 ABCC12Q96J65 1359 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 A0A087WWV3 80 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 A0A0G2JLW4 131 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 KLF18A0A0U1RQI7 1052 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 A0A1B0GUL7 405 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 ZSCAN12O43309 604 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 CUTAO60888 179 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 IGSF3O75054 1194 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 POLR3DP05423 398 aaPredicted RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 PFKFB1P16118 471 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 CABP4P57796 275 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 ETF1P62495 437 aaKnown RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 KIF23Q02241 960 aaPredicted RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 SLC39A14Q15043 492 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 DPCR1Q3MIW9 517 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 CCDC158Q5M9N0 1113 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 TTC39AQ5SRH9 613 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 AXDND1Q5T1B0 1012 aaPredicted RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 OLFM4Q6UX06 510 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 RALYLQ86SE5 291 aaKnown RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 REXO1L1PQ8IX06 675 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 MB21D2Q8IYB1 491 aaPredicted RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 JMYQ8N9B5 988 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 CCDC191Q8NCU4 936 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 APPBP2Q92624 585 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 ERCC4Q92889 916 aaPredicted RBP4.97□□□□□ -1.61
HLA-N-201ENST00000437516 OSBP2Q969R2 916 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 TMX1Q9H3N1 280 aa4.97□□□□□ -1.61
HLA-N-201ENST00000437516 ARGLU1Q9NWB6 273 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms