RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CYP21A2P08686 494 aa18.29■□□□□ 0.52
SGCE-205ENST00000437425 MCM4P33991 863 aa18.29■□□□□ 0.52
SGCE-205ENST00000437425 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
SGCE-205ENST00000437425 PI16Q6UXB8 463 aa18.29■□□□□ 0.52
SGCE-205ENST00000437425 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
SGCE-205ENST00000437425 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
SGCE-205ENST00000437425 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
SGCE-205ENST00000437425 TFCP2L1Q9NZI6 479 aa18.29■□□□□ 0.52
SGCE-205ENST00000437425 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 GPAA1O43292 621 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 PDE6AP16499 860 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 BCAMP50895 628 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
SGCE-205ENST00000437425 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 LEMD3Q9Y2U8 911 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 DOCK2Q92608 1830 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 GNAT2P19087 354 aa18.28■□□□□ 0.52
SGCE-205ENST00000437425 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
SGCE-205ENST00000437425 ZNF532Q9HCE3 1301 aa18.27■□□□□ 0.52
SGCE-205ENST00000437425 TCRBV5S4A2TA0A5A2 114 aa18.27■□□□□ 0.51
SGCE-205ENST00000437425 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.51
SGCE-205ENST00000437425 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.51
SGCE-205ENST00000437425 BBOX1O75936 387 aa18.26■□□□□ 0.51
SGCE-205ENST00000437425 CHGBP05060 677 aa18.26■□□□□ 0.51
SGCE-205ENST00000437425 ALX1Q15699 326 aa18.26■□□□□ 0.51
SGCE-205ENST00000437425 DHX32Q7L7V1 743 aaKnown RBP18.26■□□□□ 0.51
SGCE-205ENST00000437425 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
SGCE-205ENST00000437425 AIDAQ96BJ3 306 aa18.26■□□□□ 0.51
SGCE-205ENST00000437425 TNRC6CQ9HCJ0 1690 aaKnown RBP18.25■□□□□ 0.51
SGCE-205ENST00000437425 KLRG2A4D1S0 409 aaPredicted RBP18.25■□□□□ 0.51
SGCE-205ENST00000437425 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
SGCE-205ENST00000437425 HOXA10P31260 410 aaPredicted RBP18.25■□□□□ 0.51
SGCE-205ENST00000437425 HIBADHP31937 336 aaKnown RBP18.25■□□□□ 0.51
SGCE-205ENST00000437425 FBXL16Q8N461 479 aa18.25■□□□□ 0.51
SGCE-205ENST00000437425 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
SGCE-205ENST00000437425 LRP2BPQ9P2M1 347 aa18.25■□□□□ 0.51
SGCE-205ENST00000437425 XDHP47989 1333 aa18.25■□□□□ 0.51
SGCE-205ENST00000437425 C15orf52Q6ZUT6 534 aaKnown RBP18.24■□□□□ 0.51
SGCE-205ENST00000437425 NOL8Q76FK4 1167 aaKnown RBP18.24■□□□□ 0.51
SGCE-205ENST00000437425 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
SGCE-205ENST00000437425 PNPLA7Q6ZV29 1317 aa18.24■□□□□ 0.51
SGCE-205ENST00000437425 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
SGCE-205ENST00000437425 E7EWF7 191 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 SNAP23O00161 211 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 ZNF213O14771 459 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 FGAP02671 866 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 MAGEB6Q8N7X4 407 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 COL4A1P02462 1669 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
SGCE-205ENST00000437425 CPA1P15085 419 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 GYG1P46976 350 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 SKOR2Q2VWA4 1001 aaPredicted RBP18.23■□□□□ 0.51
SGCE-205ENST00000437425 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 STRBPQ96SI9 672 aaKnown RBP18.23■□□□□ 0.51
SGCE-205ENST00000437425 BRIP1Q9BX63 1249 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 NACAP1Q9BZK3 213 aa18.23■□□□□ 0.51
SGCE-205ENST00000437425 TNS1Q9HBL0 1735 aaKnown RBP18.22■□□□□ 0.51
SGCE-205ENST00000437425 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
SGCE-205ENST00000437425 FGD1P98174 961 aa18.22■□□□□ 0.51
SGCE-205ENST00000437425 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
SGCE-205ENST00000437425 BRD1O95696 1058 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 DDR1Q08345 913 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 TRDNQ13061 729 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
SGCE-205ENST00000437425 CCDC24Q8N4L8 307 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 AGXT2Q9BYV1 514 aa18.21■□□□□ 0.51
SGCE-205ENST00000437425 TAF1P21675 1872 aa18.2■□□□□ 0.5
SGCE-205ENST00000437425 FOXP2O15409 715 aa18.2■□□□□ 0.5
SGCE-205ENST00000437425 PDCP20941 246 aa18.2■□□□□ 0.5
SGCE-205ENST00000437425 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
SGCE-205ENST00000437425 TOB2Q14106 344 aaPredicted RBP18.2■□□□□ 0.5
SGCE-205ENST00000437425 ME3Q16798 604 aa18.2■□□□□ 0.5
SGCE-205ENST00000437425 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
SGCE-205ENST00000437425 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
SGCE-205ENST00000437425 TPCN1Q9ULQ1 816 aa18.2■□□□□ 0.5
SGCE-205ENST00000437425 APPP05067 770 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 PDE6BP35913 854 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 Q6ZUG5 572 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 STOX1Q6ZVD7 989 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
SGCE-205ENST00000437425 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 NRXN2Q9P2S2 1712 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 PARP3Q9Y6F1 533 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 SALL1Q9NSC2 1324 aa18.19■□□□□ 0.5
SGCE-205ENST00000437425 BAG4O95429 457 aaKnown RBP18.18■□□□□ 0.5
SGCE-205ENST00000437425 MCM5P33992 734 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 WDR66Q8TBY9 1149 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 ABCF2Q9UG63 623 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 ATP6V1DQ9Y5K8 247 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 IRS2Q9Y4H2 1338 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 DUOX1Q9NRD9 1551 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms