RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 FKBP4Q02790 459 aaKnown RBP eCLIP11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 TEFQ10587 303 aa11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 EAPPQ56P03 285 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 FMNL2Q96PY5 1086 aa11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 ATP13A2Q9NQ11 1180 aa11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 ZNF330Q9Y3S2 320 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-208ENST00000436412 DIAPH1O60610 1272 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 NPR1P16066 1061 aa11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 CTHP32929 405 aa11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 EPHX2P34913 555 aa11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 CNTROBQ8N137 903 aa11.31□□□□□ -0.6
NIF3L1-208ENST00000436412 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 FZD9O00144 591 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 A1BGP04217 495 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 DZIP3Q86Y13 1208 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 GPC2Q8N158 579 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 GAS2L2Q8NHY3 880 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 ZNF652Q9Y2D9 606 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
NIF3L1-208ENST00000436412 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 ALDH1B1P30837 517 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 RGS19P49795 217 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
NIF3L1-208ENST00000436412 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 CACNA1SQ13698 1873 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 ECE1P42892 770 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 MPNDQ8N594 471 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 FOXJ1Q92949 421 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-208ENST00000436412 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 LCE2AQ5TA79 106 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 MAP1SQ66K74 1059 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 PSMD1Q99460 953 aa11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 DDX21Q9NR30 783 aaKnown RBP eCLIP11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 RNF123Q5XPI4 1314 aa11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
NIF3L1-208ENST00000436412 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 CAPNS2Q96L46 248 aa11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
NIF3L1-208ENST00000436412 BTBD11A6QL63 1104 aa11.25□□□□□ -0.61
NIF3L1-208ENST00000436412 EIF6P56537 245 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-208ENST00000436412 TSC1Q92574 1164 aa11.25□□□□□ -0.61
NIF3L1-208ENST00000436412 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-208ENST00000436412 NIP7Q9Y221 180 aaKnown RBP eCLIP11.25□□□□□ -0.61
NIF3L1-208ENST00000436412 CCDC85CA6NKD9 419 aa11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 CA12O43570 354 aa11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 MAP2K2P36507 400 aa11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 USP50Q70EL3 339 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 USP16Q9Y5T5 823 aa11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 WASF2Q9Y6W5 498 aa11.24□□□□□ -0.61
NIF3L1-208ENST00000436412 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-208ENST00000436412 CRY2Q49AN0 593 aa11.23□□□□□ -0.61
NIF3L1-208ENST00000436412 OLFM4Q6UX06 510 aa11.23□□□□□ -0.61
NIF3L1-208ENST00000436412 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
NIF3L1-208ENST00000436412 TNRC18O15417 2968 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-208ENST00000436412 THSD7BQ9C0I4 1608 aa11.23□□□□□ -0.61
NIF3L1-208ENST00000436412 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 KCNQ3O43525 872 aa11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 TRIM26Q12899 539 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 SKIV2LQ15477 1246 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 TRPM7Q96QT4 1865 aa11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 NYXQ9GZU5 481 aa11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 GJA3Q9Y6H8 435 aa11.22□□□□□ -0.61
NIF3L1-208ENST00000436412 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 SCNN1DP51172 638 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 CST9Q5W186 159 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 HHIPL1Q96JK4 782 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 CDK15Q96Q40 435 aa11.21□□□□□ -0.61
NIF3L1-208ENST00000436412 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms