RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 KCNQ5Q9NR82 932 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 ANP32CO43423 234 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 EGFRP00533 1210 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 IGKV5-2P06315 115 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 CWF19L2Q2TBE0 894 aaKnown RBP9.89□□□□□ -0.83
VPS50-203ENST00000436177 ANGEL2Q5VTE6 544 aaKnown RBP9.89□□□□□ -0.83
VPS50-203ENST00000436177 RGMBQ6NW40 437 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 MPHOSPH8Q99549 860 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 GREM2Q9H772 168 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
VPS50-203ENST00000436177 TRPM7Q96QT4 1865 aa9.89□□□□□ -0.83
VPS50-203ENST00000436177 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 MYO3BQ8WXR4 1341 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 NF2P35240 595 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 ZNF280AP59817 542 aaPredicted RBP9.88□□□□□ -0.83
VPS50-203ENST00000436177 FLIIQ13045 1269 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 SCARF1Q14162 830 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
VPS50-203ENST00000436177 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 CDCA5Q96FF9 252 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 MS4A4AQ96JQ5 239 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 MYOZ2Q9NPC6 264 aa9.88□□□□□ -0.83
VPS50-203ENST00000436177 FANCIQ9NVI1 1328 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
VPS50-203ENST00000436177 CCT4P50991 539 aaKnown RBP9.87□□□□□ -0.83
VPS50-203ENST00000436177 FKBP1BP68106 108 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 GCKRQ14397 625 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 DLK2Q6UY11 383 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 DNAAF4Q8WXU2 420 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 COA1Q9GZY4 146 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 MINPP1Q9UNW1 487 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 LEMD3Q9Y2U8 911 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
VPS50-203ENST00000436177 ZNF609O15014 1411 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 TAF1P21675 1872 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 COL4A1P02462 1669 aa9.87□□□□□ -0.83
VPS50-203ENST00000436177 ASTN2O75129 1339 aaPredicted RBP9.86□□□□□ -0.83
VPS50-203ENST00000436177 PITPNM2Q9BZ72 1349 aa9.86□□□□□ -0.83
VPS50-203ENST00000436177 ITGA6P23229 1130 aa9.86□□□□□ -0.83
VPS50-203ENST00000436177 KIF23Q02241 960 aaPredicted RBP9.86□□□□□ -0.83
VPS50-203ENST00000436177 DGKZQ13574 1117 aa9.86□□□□□ -0.83
VPS50-203ENST00000436177 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
VPS50-203ENST00000436177 LINS1Q8NG48 757 aa9.86□□□□□ -0.83
VPS50-203ENST00000436177 HDAC9Q9UKV0 1011 aa9.86□□□□□ -0.83
VPS50-203ENST00000436177 ZNF804BA4D1E1 1349 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 ANKRD18BA2A2Z9 1011 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 H7C1W4 665 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 MMP14P50281 582 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 IFIT5Q13325 482 aaKnown RBP9.85□□□□□ -0.83
VPS50-203ENST00000436177 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
VPS50-203ENST00000436177 STRIP1Q5VSL9 837 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 G2E3Q7L622 706 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 MCOLN1Q9GZU1 580 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 SAGE1Q9NXZ1 904 aa9.85□□□□□ -0.83
VPS50-203ENST00000436177 FAM155AB1AL88 458 aaPredicted RBP9.84□□□□□ -0.83
VPS50-203ENST00000436177 TRPA1O75762 1119 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 SLC10A3P09131 477 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 CCDC184Q52MB2 194 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 DACT2Q5SW24 774 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 ZNF804AQ7Z570 1209 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 APOBEC3FQ8IUX4 373 aaKnown RBP9.84□□□□□ -0.83
VPS50-203ENST00000436177 WDR63Q8IWG1 891 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 GMLQ99445 158 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 PLA2G12BQ9BX93 195 aa9.84□□□□□ -0.83
VPS50-203ENST00000436177 SASH1O94885 1247 aa9.83□□□□□ -0.84
VPS50-203ENST00000436177 MLLT1Q03111 559 aaPredicted RBP9.83□□□□□ -0.84
VPS50-203ENST00000436177 EXOSC9Q06265 439 aaKnown RBP9.83□□□□□ -0.84
VPS50-203ENST00000436177 CHRNDQ07001 517 aa9.83□□□□□ -0.84
VPS50-203ENST00000436177 NBPF9Q3BBW0 867 aa9.83□□□□□ -0.84
VPS50-203ENST00000436177 TTLL5Q6EMB2 1281 aa9.83□□□□□ -0.84
VPS50-203ENST00000436177 KIAA0825Q8IV33 1275 aa9.83□□□□□ -0.84
VPS50-203ENST00000436177 ZIC5Q96T25 663 aa9.83□□□□□ -0.84
VPS50-203ENST00000436177 C9orf78Q9NZ63 289 aaPredicted RBP9.83□□□□□ -0.84
VPS50-203ENST00000436177 MYO1BO43795 1136 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 GTF2IP78347 998 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 DLGAP5Q15398 846 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 CCDC57Q2TAC2 916 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 ARMC9Q7Z3E5 817 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 RASAL3Q86YV0 1011 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 MXD3Q9BW11 206 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 RNF186Q9NXI6 227 aa9.82□□□□□ -0.84
VPS50-203ENST00000436177 SCN9AQ15858 1988 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 PAPPA2Q9BXP8 1791 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
VPS50-203ENST00000436177 WTIPA6NIX2 430 aaPredicted RBP9.81□□□□□ -0.84
VPS50-203ENST00000436177 F6X3S4 739 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 UBE2Q2LH0YL09 131 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 GRM8O00222 908 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 WNT10BO00744 389 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 CSF1RP07333 972 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 SREBF2Q12772 1141 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 PRAMEF18Q5VWM3 479 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 SLC4A10Q6U841 1118 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms