RNA–Protein interactions for RNA: ENST00000434839.2

XIST-206, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 2,865 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-206ENST00000434839 AARSP49588 968 aaKnown RBP eCLIP9.29□□□□□ -0.924e-7■□□□□ 11.3
XIST-206ENST00000434839 ACTN3Q08043 901 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 KIF4BQ2VIQ3 1234 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 CCDC40Q4G0X9 1142 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 TTC22Q5TAA0 569 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 THEMIS2Q5TEJ8 643 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 CCDC181Q5TID7 509 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 TRIM65Q6PJ69 517 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 CCDC114Q96M63 670 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 NAT10Q9H0A0 1025 aaKnown RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 MMADHCQ9H3L0 296 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 MRFAP1Q9Y605 127 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 WDR7Q9Y4E6 1490 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 ABCA8O94911 1581 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 MEFVO15553 781 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 ZEB2O60315 1214 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 TUBBP07437 444 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 CASP8Q14790 479 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 SLMAPQ14BN4 828 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 LRRC23Q53EV4 343 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 MICALCLQ6ZW33 695 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 TESK2Q96S53 571 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 VCPKMTQ9H867 229 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 VIPAS39Q9H9C1 493 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 PCDHGC5Q9Y5F6 944 aa9.29□□□□□ -0.92
XIST-206ENST00000434839 POLR3AO14802 1390 aaPredicted RBP9.29□□□□□ -0.92
XIST-206ENST00000434839 MAGI2Q86UL8 1455 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 PDLIM1O00151 329 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 FERP16591 822 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 PAPOLAP51003 745 aaKnown RBP9.28□□□□□ -0.92
XIST-206ENST00000434839 ZBED6P86452 979 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 USP4Q13107 963 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 MIS18BP1Q6P0N0 1132 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 SLC39A2Q9NP94 309 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
XIST-206ENST00000434839 CORO1CQ9ULV4 474 aaPredicted RBP9.28□□□□□ -0.92
XIST-206ENST00000434839 TRPM1Q7Z4N2 1603 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 GOLGA6L10A6NI86 522 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 PHACTR2O75167 634 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 NAT1P18440 290 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
XIST-206ENST00000434839 CCDC170Q8IYT3 715 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 KIRREL3Q8IZU9 778 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 TMEM57Q8N5G2 664 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 MSANTD4Q8NCY6 345 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 ZFAND2BQ8WV99 257 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 KIAA0556O60303 1618 aa9.28□□□□□ -0.92
XIST-206ENST00000434839 LIN7AO14910 233 aaPredicted RBP9.27□□□□□ -0.92
XIST-206ENST00000434839 STX6O43752 255 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 PRPF6O94906 941 aaKnown RBP9.27□□□□□ -0.92
XIST-206ENST00000434839 SLC4A2P04920 1241 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 SFPQP23246 707 aaKnown RBP eCLIP9.27□□□□□ -0.92
XIST-206ENST00000434839 DEUP1Q05D60 604 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 SPTY2D1Q68D10 685 aaPredicted RBP9.27□□□□□ -0.92
XIST-206ENST00000434839 PREX1Q8TCU6 1659 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 BCAS4Q8TDM0 211 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 DTNBP1Q96EV8 351 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 UBA5Q9GZZ9 404 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 DNAJC25Q9H1X3 360 aa9.27□□□□□ -0.92
XIST-206ENST00000434839 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 MYOM2P54296 1465 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 PPIP5K1Q6PFW1 1433 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 CDHR2Q9BYE9 1310 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 SMNDC1O75940 238 aaKnown RBP eCLIP9.27□□□□□ -0.932e-7■■■■■ 34.3
XIST-206ENST00000434839 NBPF7P0C2Y1 421 aaPredicted RBP9.27□□□□□ -0.93
XIST-206ENST00000434839 IRAK1P51617 712 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 IRF5Q13568 498 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 DCTN1Q14203 1278 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 SKIDA1Q1XH10 827 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 TRIM58Q8NG06 486 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
XIST-206ENST00000434839 SYTL4Q96C24 671 aaPredicted RBP9.27□□□□□ -0.93
XIST-206ENST00000434839 FMNL2Q96PY5 1086 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 RTEL1Q9NZ71 1219 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
XIST-206ENST00000434839 MAP3K5Q99683 1374 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 IFFO1Q0D2I5 559 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 CCDC15Q0P6D6 951 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 TMED1Q13445 227 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 DRP2Q13474 957 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 MTHFD1LQ6UB35 978 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 CKAP2LQ8IYA6 745 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 TRIM4Q9C037 500 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 CLSTN2Q9H4D0 955 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 TMEM165Q9HC07 324 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 MED14O60244 1454 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 A6NNZ2 444 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 EIF3HO15372 352 aaKnown RBP eCLIP9.26□□□□□ -0.93
XIST-206ENST00000434839 IBSPP21815 317 aaPredicted RBP9.26□□□□□ -0.93
XIST-206ENST00000434839 TUBB8Q3ZCM7 444 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 FCHSD1Q86WN1 690 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 RBM41Q96IZ5 413 aaKnown RBP9.26□□□□□ -0.93
XIST-206ENST00000434839 JPH4Q96JJ6 628 aa9.26□□□□□ -0.93
XIST-206ENST00000434839 PAGR1Q9BTK6 254 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms