RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 MRE11P49959 708 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 CUL4AQ13619 759 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 KSR2Q6VAB6 950 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 TICAM2Q86XR7 235 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 LINS1Q8NG48 757 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 ORAI2Q96SN7 254 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 KRTAP4-6Q9BYQ5 205 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 LGR6Q9HBX8 967 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL17A1-204ENST00000433822 EXOC6BQ9Y2D4 811 aa9.03□□□□□ -0.96
COL17A1-204ENST00000433822 LAMB4A4D0S4 1761 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 RGPD5Q99666 1765 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 GOLGA6L3A6NEY3 463 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 SOBPA7XYQ1 873 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 GLRX3O76003 335 aaKnown RBP9.02□□□□□ -0.97
COL17A1-204ENST00000433822 R3HDM1Q15032 1099 aaKnown RBP9.02□□□□□ -0.97
COL17A1-204ENST00000433822 PPP1R42Q7Z4L9 355 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 USHBP1Q8N6Y0 703 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 RHPN1Q8TCX5 695 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
COL17A1-204ENST00000433822 CDK15Q96Q40 435 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
COL17A1-204ENST00000433822 CHD4Q14839 1912 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 PI4KAP2A4QPH2 592 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 KDM6AO15550 1401 aaPredicted RBP9.01□□□□□ -0.97
COL17A1-204ENST00000433822 MAN1A2O60476 641 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 CTHP32929 405 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 CNTROBQ8N137 903 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 PI4KAP1Q8N8J0 262 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 PI4K2BQ8TCG2 481 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 RAPGEF4Q8WZA2 1011 aa9.01□□□□□ -0.97
COL17A1-204ENST00000433822 PHAXQ9H814 394 aaKnown RBP9.01□□□□□ -0.97
COL17A1-204ENST00000433822 HIP1O00291 1037 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 SURF6O75683 361 aaKnown RBP9□□□□□ -0.97
COL17A1-204ENST00000433822 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
COL17A1-204ENST00000433822 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
COL17A1-204ENST00000433822 HSPA4P34932 840 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 GJA5P36382 358 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 LYPD8Q6UX82 237 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 FAM43AQ8N2R8 423 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 GPATCH3Q96I76 525 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 SLC52A2Q9HAB3 445 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 SNRKQ9NRH2 765 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 RAD50Q92878 1312 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
COL17A1-204ENST00000433822 RFX7Q2KHR2 1363 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 GRM8O00222 908 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 SGSM2O43147 1006 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 SRGAP3O43295 1099 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
COL17A1-204ENST00000433822 BAG4O95429 457 aaKnown RBP8.99□□□□□ -0.97
COL17A1-204ENST00000433822 PHKG2P15735 406 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 NR5A1Q13285 461 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 SF3B2Q13435 895 aaKnown RBP8.99□□□□□ -0.97
COL17A1-204ENST00000433822 ARID5BQ14865 1188 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
COL17A1-204ENST00000433822 IFNL2Q8IZJ0 200 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 CLASRPQ8N2M8 674 aaKnown RBP8.99□□□□□ -0.97
COL17A1-204ENST00000433822 RUFY2Q8WXA3 655 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 DCAF5Q96JK2 942 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 RREB1Q92766 1687 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 SLIT2O94813 1529 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
COL17A1-204ENST00000433822 SPATA31A3Q5VYP0 1347 aa8.99□□□□□ -0.97
COL17A1-204ENST00000433822 C5P01031 1676 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 NBPF7P0C2Y1 421 aaPredicted RBP8.98□□□□□ -0.97
COL17A1-204ENST00000433822 EIF2S2P20042 333 aaKnown RBP8.98□□□□□ -0.97
COL17A1-204ENST00000433822 KCNMA1Q12791 1236 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
COL17A1-204ENST00000433822 ZNF790Q6PG37 636 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 KCNB2Q92953 911 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 TM6SF1Q9BZW5 370 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 MAP3K2Q9Y2U5 619 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 MEGF6O75095 1541 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 UBR2Q8IWV8 1755 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 PAPPAQ13219 1627 aa8.98□□□□□ -0.97
COL17A1-204ENST00000433822 ABCA3Q99758 1704 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 KCNQ3O43525 872 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 UPP2O95045 317 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 ZNF445P59923 1031 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 C6orf118Q5T5N4 469 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 ZNF784Q8NCA9 323 aaPredicted RBP8.97□□□□□ -0.97
COL17A1-204ENST00000433822 FOXJ1Q92949 421 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 ITPKCQ96DU7 683 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 ZFAND3Q9H8U3 227 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 ECHDC1Q9NTX5 307 aa8.97□□□□□ -0.97
COL17A1-204ENST00000433822 C9orf78Q9NZ63 289 aaPredicted RBP8.97□□□□□ -0.97
COL17A1-204ENST00000433822 APBB1O00213 710 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 PPFIA3O75145 1194 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 BRD1O95696 1058 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 SNRPA1P09661 255 aaKnown RBP8.96□□□□□ -0.98
COL17A1-204ENST00000433822 SSFA2P28290 1259 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 NEK4P51957 841 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 NEXNQ0ZGT2 675 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms